Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq191 114 1e-20
>seq191
Length=257482
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||||||| | || |||||||| || || | ||
Sbjct 143177 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCT 143118
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || || || ||||| || ||||| || || || ||
Sbjct 143117 GATACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 143058
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || || |||| ||| | ||| | || || ||||||
Sbjct 143057 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 142998
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || |||||||| ||| | || ||||| | ||| | || ||||||
Sbjct 142997 ATCCAGAAGGAGTCTACCCTCCACCTGGTTCTCCGTCTCCGTGGTGGC 142950
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || |||||||| |||||| | || ||||| || || || | ||
Sbjct 143633 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCT 143574
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || ||||| || || || |||
Sbjct 143573 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAA 143514
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || || | || || | ||| | ||||| ||||||
Sbjct 143513 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAAC 143454
Query 27168 ATTCAAAAGGAGTCGAC 27184
||||| |||||||| ||
Sbjct 143453 ATTCAGAAGGAGTCTAC 143437
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||||||| | ||||| ||||| || || ||||
Sbjct 143405 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTTGAGGTCGAGTCGTCG 143346
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || || ||||| || || || || || || ||
Sbjct 143345 GATACTATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 143286
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || | || || | || | || || ||||||
Sbjct 143285 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTCTCGGACTACAAC 143226
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || |||||| | ||| | || ||||| ||
Sbjct 143225 ATCCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGTCTTCGTGGTGGTAT 143176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915964456960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |