Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03] 448 sequences; 26,695,738 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq236 132 4e-26 >seq236 Length=225512 Score = 132 bits (146), Expect = 4e-26 Identities = 344/518 (66%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 4584 ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATA 4643 || || ||||| || || || || |||||||| | ||| | ||| |||||||| || Sbjct 196819 ATAAGCTCGTTGGAGAAAGTCAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATG 196878 Query 4644 GCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGG-GA 4702 | |||||| | ||||| ||||| || || || || |||||||| || || | || || Sbjct 196879 GAGGCAAAAGCACCAGAGAAGAAGATACCCTCAACAGCGGCAAAGGCAACAAGACGCTGA 196938 Query 4703 CCCGAA--CGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTA 4760 | || ||| || | ||||| ||||||| || | ||||||| || || | Sbjct 196939 GCAAAAGTCGA-CT--CCTTGTCAGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGA 196995 Query 4761 ACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTTCAAATGGGTCTTGA 4817 | ||| ||||| |||| || ||||| || | || | | | || || || | | Sbjct 196996 ATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTATGTGCGCTGAGCA---GGCTCCTTA 197052 Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || || ||||| || || | || | || || || || || || || ||||| Sbjct 197053 ATGTAGGTGTCGATCAGCAAAGAGTAGGTCTCCGAGTGAATGTTCTCCATCATGATCTGG 197112 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 || ||||||||||| | ||||| | | || || || | | || | || || ||| Sbjct 197113 AAACCGTAAAAGCAACGGGCTTCGGGGATCTGGACCTCAGCAGAGAAACGCTCGACCAAG 197172 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTAC 4997 || ||||| || ||||||||| ||| || || || || | ||| ||||| || ||| || Sbjct 197173 TTCTCGTTGACAATACCGTCAGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGAAC 197232 Query 4998 TGTTCGTC---AGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCT 5054 || || || || | | | || ||||||| | | | ||| |||| | ||||| || Sbjct 197233 TGCTCATCCTTAGTCATGCGGTTATTCCAGTCGTGAAGATCCTTAGAAAGATCAATCTCC 197292 Query 5055 TCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | ||||| || || || || || || |||||||| Sbjct 197293 TCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 197330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047268309184