Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq236 132 4e-26
>seq236
Length=225512
Score = 132 bits (146), Expect = 4e-26
Identities = 344/518 (66%), Gaps = 15/518 (3%)
Strand=Plus/Plus
Query 4584 ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATA 4643
|| || ||||| || || || || |||||||| | ||| | ||| |||||||| ||
Sbjct 196819 ATAAGCTCGTTGGAGAAAGTCAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATG 196878
Query 4644 GCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGG-GA 4702
| |||||| | ||||| ||||| || || || || |||||||| || || | || ||
Sbjct 196879 GAGGCAAAAGCACCAGAGAAGAAGATACCCTCAACAGCGGCAAAGGCAACAAGACGCTGA 196938
Query 4703 CCCGAA--CGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTA 4760
| || ||| || | ||||| ||||||| || | ||||||| || || |
Sbjct 196939 GCAAAAGTCGA-CT--CCTTGTCAGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGA 196995
Query 4761 ACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTTCAAATGGGTCTTGA 4817
| ||| ||||| |||| || ||||| || | || | | | || || || | |
Sbjct 196996 ATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTATGTGCGCTGAGCA---GGCTCCTTA 197052
Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877
|| || ||||| || || | || | || || || || || || || |||||
Sbjct 197053 ATGTAGGTGTCGATCAGCAAAGAGTAGGTCTCCGAGTGAATGTTCTCCATCATGATCTGG 197112
Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937
|| ||||||||||| | ||||| | | || || || | | || | || || |||
Sbjct 197113 AAACCGTAAAAGCAACGGGCTTCGGGGATCTGGACCTCAGCAGAGAAACGCTCGACCAAG 197172
Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTAC 4997
|| ||||| || ||||||||| ||| || || || || | ||| ||||| || ||| ||
Sbjct 197173 TTCTCGTTGACAATACCGTCAGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGAAC 197232
Query 4998 TGTTCGTC---AGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCT 5054
|| || || || | | | || ||||||| | | | ||| |||| | ||||| ||
Sbjct 197233 TGCTCATCCTTAGTCATGCGGTTATTCCAGTCGTGAAGATCCTTAGAAAGATCAATCTCC 197292
Query 5055 TCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092
|| | ||||| || || || || || || ||||||||
Sbjct 197293 TCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 197330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047268309184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |