Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq236 104 3e-17
>seq236
Length=225512
Score = 104 bits (114), Expect = 3e-17
Identities = 365/565 (65%), Gaps = 10/565 (2%)
Strand=Plus/Plus
Query 48156 TGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCA 48215
|||||||| ||||| | | || | ||||| || || || | ||||||||| | |||
Sbjct 196798 TGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACCGGGCATCATACCA 196857
Query 48216 CGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCC 48275
|| || |||||||| || | || |||| ||||| ||||| || || || || ||
Sbjct 196858 CGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGATACCCTCAACAGCG 196917
Query 48276 GCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT--GTA-TCCACCGTTGTGCC 48332
||||| || ||| | || | || | | || |||| ||| ||||| | |||
Sbjct 196918 GCAAAGGCAACAAGACGCTGAGCAAAAGTCGACTCCTTGTCAGTAATCCACTTCAGGGCC 196977
Query 48333 CAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttt 48392
|| || ||||| | || || || || || || || || ||||| | |
Sbjct 196978 CAGTCGGCCTTGCGGCGAATGCAGGGAATAGTGTCAATGGCGTTGAAGAGGTATGTGCGC 197037
Query 48393 tCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATAT 48450
| | || |||| ||| || || || | ||||| || | || |||||||| |
Sbjct 197038 TGAGCAGGCTCCTTAATGTAGGTGTCGATCAGCAAAGAGTAGG--TCTCCGAGTGAATGT 197095
Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC 48510
| || || ||||| || |||||||| || | ||||| | |||||| ||||| | |
Sbjct 197096 TCTCCATCATGATCTGGAAACCGTAAAAGCAACGGGCTTCGGGGATCTGGACCTCAGCAG 197155
Query 48511 AAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATA 48570
| || || || |||| ||||| || || || || ||| || || || || || | |
Sbjct 197156 AGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCGGCGAAGAAGGCAAGAA 197215
Query 48571 CATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTT 48627
| || || || | | || | ||||| | ||||||||||| | | ||| |
Sbjct 197216 CGTGAGAGATGAAGAACTGCTCATCCTTAGTCATGCGGTTATTCCAGTCGTGAAGATCCT 197275
Query 48628 TTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCC 48687
| || | ||| | || || || ||||| || || ||||| || || || ||||| | ||
Sbjct 197276 TAGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCC 197335
Query 48688 ATATATCACTGTATTGGATTGGGAA 48712
| || || ||| | ||| |||||
Sbjct 197336 AGATCTCGTGGTACTTGATAGGGAA 197360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694664909854720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |