Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq236 120 4e-22
>seq236
Length=225512
Score = 120 bits (132), Expect = 4e-22
Identities = 556/875 (64%), Gaps = 18/875 (2%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|||||||| ||| | ||||| |||||||| || || || || || | | || || ||
Sbjct 196492 TTTTGGTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCACCAAGAGAGATGTTC 196551
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || || | || || | || | || | | |
Sbjct 196552 TCCATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTGTCGTTACCGAGAGCGACCAGA 196611
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | || || ||||| || || || |||||||| | ||| |||||| || | ||
Sbjct 196612 AGACGGTCGGCGACGAACTCGATGTAGGTTTTCATGAGGTCAGCATTCATACCGAGAAGA 196671
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT- 46577
| || |||||||| ||||| ||||| | ||||| ||| ||||| | || ||
Sbjct 196672 GCGCAGGGAAGAGCCTCGGTAAGGAACTCCTTCTCAATGACGACGGCATCAGTGATGATG 196731
Query 46578 -CGATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634
| | | |||| || || || || || ||| || || | | || ||
Sbjct 196732 TCCTGGATCAACTGCTTGCTGG---GGCGGTTGT-TCAGGTGAGAGAAAAGAAGGCAGGC 196787
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
||| || ||||| || ||||| | | || | ||||| || || || | || ||
Sbjct 196788 AAAGTCCGTGTGAAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAAACCGGG 196847
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754
||| | |||||||| |||||||| || | || |||| ||||| ||||| || ||
Sbjct 196848 CATCATACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAAGCACCAGAGAAGAAGATACC 196907
Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCA 46811
|| ||||| || || || ||||| | || | || | | || || | | |||||
Sbjct 196908 CTCAACAGCGGCAAAGGCAACAAGACGCTGAGCAAAAGTCGACTCCTTGTCAGTAATCCA 196967
Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871
| | | ||||| || ||||| | || || || || || || || || |||||
Sbjct 196968 CTTCAGGGCCCAGTCGGCCTTGCGGCGAATGCAGGGAATAGTGTCAATGGCGTTGAAGAG 197027
Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCT 46929
| | | | || || |||| || || || || | ||||| || | ||
Sbjct 197028 GTATGTGCGCTGAGCAGGCTCCTTAATGTAGGTGTCGATCAGCAAAGAGTAGG--TCTCC 197085
Query 46930 GAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGT 46989
|| |||||||| || || ||||| || |||||||| || | ||||| | |||||
Sbjct 197086 GAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCAACGGGCTTCGGGGATCTGG 197145
Query 46990 ACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049
||||| | | | || || || ||| ||||| || || || || ||| || || ||
Sbjct 197146 ACCTCAGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCGGCGAAG 197205
Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCA 47106
|| || | || || || || | | ||||| |||||| | |||||||||||
Sbjct 197206 AAGGCAAGAACGTGAGAGATGAAGAACTGCTCATCCTTAGTCATGCGGTTATTCCAGTCG 197265
Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166
| | ||| || || | ||| | || || || |||||||| || ||||| || || ||
Sbjct 197266 TGAAGATCCTTAGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 197325
Query 47167 TACATATTCCATATATCACGATATTGGATCGGAAA 47201
||||| | ||| || || | || | ||| || ||
Sbjct 197326 TACATTTGCCAGATCTCGTGGTACTTGATAGGGAA 197360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712930407567360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |