Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq191 118 2e-21
seq438 100 7e-16
seq419 84.2 5e-11
>seq191
Length=257482
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || ||||||||||| || || |||||||| |||| | || | |||||
Sbjct 143421 GAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGGCCATC 143480
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || |||||||| | ||| ||||||| | || || ||||| ||
Sbjct 143481 CTCAAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 143540
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || ||||| | || | | |||| || ||| || || ||||| || ||
Sbjct 143541 CTGAATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATGGT 143600
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 143601 CTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 143633
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || || || |||||||| || ||||||||||| || | | || |
Sbjct 142959 GAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACG 143018
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || || |||||||| | ||||||||||| | || || ||
Sbjct 143019 GCCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTC 143078
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | | || ||| ||| || ||||||||
Sbjct 143079 CTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGAGT 143138
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || |||||||||||||||| ||||||
Sbjct 143139 GATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 143177
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || ||||||||||| || | | ||| | ||||| || |
Sbjct 143199 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCATCCTCAA 143257
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || ||||| || || | ||||||||||| | ||| || ||||| || || |
Sbjct 143258 GCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGA 143317
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | || | | || || ||| || ||||| ||||| || ||||
Sbjct 143318 TCTTCGACTTAACATTGTCGATAGTATCCGACGACTCGACCTCAAGGGTAATGGTCTTGC 143377
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| ||||| | ||||||
Sbjct 143378 CGGTCAGGGTCTTGACGAAAATCTGCAT 143405
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| ||||| || ||||| || |||||||||||||||| | || | |||||
Sbjct 143649 GAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATC 143708
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||| || || | ||||||||||| | || || ||||| ||
Sbjct 143709 CTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTC 143768
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | | || || ||| || || || || || ||
Sbjct 143769 CTGGATCTTGGACTTGACATTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGT 143828
Query 152072 TTTGCCCGTGA 152082
||||| ||||
Sbjct 143829 CTTGCCGGTGA 143839
>seq438
Length=409217
Score = 100 bits (110), Expect = 7e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || ||||| ||||| || ||||||||||| || | | || |
Sbjct 73257 GAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCG 73316
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || |||||||| || | ||||||||||| | || || ||
Sbjct 73317 GCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTC 73376
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || || || ||
Sbjct 73377 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCCAGGGT 73436
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
|| || || ||||| || ||||| |||||
Sbjct 73437 GATGGTCTTACCCGTCAGGGTCTTGACGAA 73466
>seq419
Length=149002
Score = 84.2 bits (92), Expect = 5e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| || | | || | ||||| || || || || ||||||||
Sbjct 86403 TTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 86462
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | || || ||||| || || || || ||||| | ||
Sbjct 86463 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 86522
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| ||| ||| || ||||| || || || || ||||| || ||||| |||||
Sbjct 86523 ATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTAACGAAA 86582
Query 152097 ACCTGCATTTT 152107
| |||||| ||
Sbjct 86583 ATCTGCATCTT 86593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153814177068608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |