Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20bhutanensis_20[genbank_20GCA_5F002018275.1_202017-03-03]
448 sequences; 26,695,738 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq191 138 3e-27
seq419 132 1e-25
seq438 129 1e-24
>seq191
Length=257482
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || ||||| |||||||| || ||| |||
Sbjct 143630 CAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCTCTGAC 143571
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||||||||| || || || || |||||||| ||
Sbjct 143570 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAACAG 143511
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || ||||| || ||||| | || || |||| || ||| |
Sbjct 143510 CGTCTTATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTCTCCGACTACAACATT 143451
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 143450 CAGAAGGAGTCTACTCTCCACCTTGT 143425
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| ||||| || || || || ||||| || ||||| || || ||
Sbjct 143174 CAGATCTTCGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCTGAT 143115
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 143114 ACCATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 143055
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || ||||| || || || | || || | || || ||| ||
Sbjct 143054 CGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAACATC 142995
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || || |||
Sbjct 142994 CAGAAGGAGTCTACCCTCCACCTGGTT 142968
Score = 125 bits (138), Expect = 2e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || |||||||||||||| || ||| || ||||| || || |||||
Sbjct 143839 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATTGACAATGTCAAGT 143780
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| || || || || ||||||||||| || || || ||||| || |
Sbjct 143779 CCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTGATTTTCGCTGGCA 143720
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || ||||| | || || ||||||| ||| |||| || || || || || |
Sbjct 143719 AGCAGCTTGAGGATGGCCGCACCCTCTCCGATTACAACATCCAGAAGGAGTCCACCCTTC 143660
Query 178123 ATCTTGT 178129
| |||||
Sbjct 143659 ACCTTGT 143653
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || || || || || ||||| ||||| || || ||
Sbjct 143402 CAGATTTTCGTCAAGACCCTGACCGGCAAGACCATTACCCTTGAGGTCGAGTCGTCGGAT 143343
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| |||||||| || || ||||| |||||||||||
Sbjct 143342 ACTATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 143283
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || ||||| | ||||| | || || ||| ||
Sbjct 143282 CGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTCTCGGACTACAACATC 143223
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || || || || |||| ||
Sbjct 143222 CAGAAGGAGTCCACCCTTCA-CTTGGTT 143196
>seq419
Length=149002
Score = 132 bits (146), Expect = 1e-25
Identities = 149/199 (75%), Gaps = 3/199 (2%)
Strand=Plus/Minus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| || |||| | |||||||| || || || || || || ||||||||||| ||||
Sbjct 86598 AGGTCAAGATGC---AGATTTTCGTTAAGACCCTTACGGGTAAGACGATCACCCTTGAGG 86542
Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029
| || || ||||| ||||| |||||||| ||||| |||||||| || || || |
Sbjct 86541 TCGAGTCTTCGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTC 86482
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
| ||||||||||| || || |||||||| || || ||||| || ||||| | || |||
Sbjct 86481 CCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTT 86422
Query 178090 CCGATTATAACGTCCAAAA 178108
| || || ||| |||| ||
Sbjct 86421 CTGACTACAACATCCAGAA 86403
>seq438
Length=409217
Score = 129 bits (142), Expect = 1e-24
Identities = 149/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
|||||| || || || || || || || |||||||| ||||| || || ||||||||
Sbjct 73467 TTTCGTCAAGACCCTGACGGGTAAGACCATCACCCTGGAGGTCGAGTCTTCGGACACCAT 73408
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| |||||||| ||||| |||||||| || || || || ||||||||||| || ||
Sbjct 73407 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCT 73348
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| || || ||||| || ||||| | || || | || || ||| |||| ||
Sbjct 73347 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAA 73288
Query 178109 AGAATCAACACTGCATCTTGT 178129
|| || || || || || ||
Sbjct 73287 GGAGTCCACTCTCCACCTGGT 73267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203724290582912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |