Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq59 183 4e-41
>seq59
Length=151500
Score = 183 bits (202), Expect = 4e-41
Identities = 634/982 (65%), Gaps = 24/982 (2%)
Strand=Plus/Plus
Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 53763
|||| ||| ||||| || || ||||| ||||||| | | | ||| || | || |||||
Sbjct 86847 GCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGC-GCAGTACTCGATGATCTC 86905
Query 53764 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 53823
||||||||| || || || ||||| | || | || |||||||| ||| ||
Sbjct 86906 AGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 86965
Query 53824 CGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTT 53883
|||||| || || ||||| || ||||||| ||| |||| | || | || || |
Sbjct 86966 GTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATA 87025
Query 53884 CCAGACGACACGAGCCTTTATTAT-AGATTTGTATCTCTTTTCTCTTTCGTATAGTGTAT 53942
||| | | ||||| || | ||| | || | || || |||| ||||
Sbjct 87026 CCACAGCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTT-CGTACTTGGTAT 87084
Query 53943 ACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 54002
| | ||||| || || || | | ||| ||||| || || | || ||||
Sbjct 87085 AGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACA 87144
Query 54003 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 54062
| | | ||| | |||| | || || || ||||| || | |||||||||||| | |
Sbjct 87145 TGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAGG 87204
Query 54063 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 54122
| | || | ||| | | | | ||||| || || ||||| ||||| ||||
Sbjct 87205 CAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGA 87264
Query 54123 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGT 54182
|| | | | ||||| |||||||| |||| ||| |||| | | | || || || ||||
Sbjct 87265 ACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGT 87324
Query 54183 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 54242
| || |||||||| | ||| | ||| || || || | || | |||||| |||| |||||
Sbjct 87325 TACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATAC 87384
Query 54243 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA----TTACTA 54298
| || || | ||| ||||| || | || || ||| | ||||| ||| |||
Sbjct 87385 CGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTAC-- 87442
Query 54299 ATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 54358
||| ||||| || || || ||||| || ||||| | ||||| || | || |||
Sbjct 87443 GTTG--AGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCA 87500
Query 54359 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 54418
||||| || || ||||| || ||| |||||| | | || || ||| | ||| |
Sbjct 87501 TAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGC 87560
Query 54419 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 54478
| ||| || || || || | ||||||||| || || || || | || || |
Sbjct 87561 TGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATG 87620
Query 54479 AGATTGTACGTCTCGATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGCG 54532
|| ||||| || || | | | || | || |||| || || || ||
Sbjct 87621 AGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCA------GATACCGACAGCT 87674
Query 54533 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAG 54592
|||||||| | |||||||||||| | ||||| |||||| || | || || | |||
Sbjct 87675 ACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAG 87734
Query 54593 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 54652
||| ||||||| || || |||||||| || | ||| ||||| || || || | |||
Sbjct 87735 GATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATG 87794
Query 54653 ACTGAGTTGAGTTTATCCTTAT 54674
| |||| || | |||||||
Sbjct 87795 GCCGAGTCCAGCTCTTCCTTAT 87816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718891145200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |