Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq59 100 6e-16 >seq59 Length=151500 Score = 100 bits (110), Expect = 6e-16 Identities = 267/400 (67%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 |||||| || |||| ||| | | || || | ||| | | ||||| |||||| || Sbjct 87805 CTGGACTCGGCCATTGTCTATGACCGTGACTTCAACTACCAGTACTTTGGTTTCAAGACC 87746 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 |||| | ||| ||||| ||||| |||| |||||||| || || || |||||||||| Sbjct 87745 TTGGAAAGATCCTATCTTCTCAAGCTTGACGGCAAGATTGTTGAGCGTCCTCAGCACATG 87686 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA-GAGCGTGCTC--GAGACG 248958 | ||||| || |||||||| || | || ||||| | ||||||| || || || Sbjct 87685 ATTATGCGTGTAGCTGTCGGTAT---CTGGGGTGACAATGTTGAGCGTGTTCTGGAAACT 87629 Query 248959 TACACCGGAATGA-GTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGG 249017 |||| | ||| | | | | | | || ||||| | || || ||||||||||| || Sbjct 87628 TACAACCTCATGTCGAGCAAGTTCT-TCACTCATGCATCTCCTACCCTCTTCAACGCTGG 87570 Query 249018 TACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGA 249077 ||| | | ||||| || ||||| | | | |||| | || ||| | |||| Sbjct 87569 TACTCCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGACATGAAGGAGGACAGTATCGA 87510 Query 249078 CGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCG 249136 || || |||||||| || || || | || | ||| || || | ||||| || || | Sbjct 87509 AGGTATCTATGACACCCTCAAGACTTGC-GCTATGATCTCCAAGATGGCGGGTGGCATTG 87451 Query 249137 GTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176 ||||| ||| | ||||| || | ||||| ||||| Sbjct 87450 GTCTCAACGTACACCGTATCCGTGCTACTGGTTCTTACAT 87411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073761378464320