Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq59 333 2e-86
seq38 197 1e-45
seq96 96.9 3e-15
seq24 89.7 5e-13
>seq59
Length=151500
Score = 333 bits (368), Expect = 2e-86
Identities = 1221/1892 (65%), Gaps = 46/1892 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| || | || || | || ||| || || || ||||| ||
Sbjct 85931 CTGGTCAACAGTGAACTGGATAGGAGCAGCAGCAGCTTGGGTACGCAGGTAGTACATACC 85990
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
|||||| ||||| | |||||| || || || || || | || || | ||
Sbjct 85991 CGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTACCCATGGTAGG 86050
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| ||||| | || ||||||||| |||||| ||||| || || |||||||| ||
Sbjct 86051 GTCCTTCATGTGAATGTTCAACGACTGAGACTGATCAATAAAGGCACCACGATCGGCCGC 86110
Query 22285 CATATTTATCAAT-GTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
||| || | ||| || ||| || || ||||| || ||||||||||| | |||| |
Sbjct 86111 CAT-TTGAACAACAGTGCGCTGAGAAATCTCCCAAACCGTCTTGTACAGAGACTTGATGT 86169
Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
| || || ||| |||||| || ||||| | | ||||| || || |
Sbjct 86170 CAGCAGGAATGCTGGGGATGTTCTGGATAGAACCGTTGTCGGAAATGATACGGTTCTTCA 86229
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTCACCACT 22462
| | ||| ||||| ||| | | | || || | || | |||| || || ||
Sbjct 86230 TGTTGTCGGACCACAGACCAAGGTCAACCAGGTCACGAAGCA-ACCACGGGTTGACAACC 86288
Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522
|| ||||| || | ||| || ||||| |||||||||||||| ||| | || ||||| |
Sbjct 86289 TGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGCTCGAAGCAC 86348
Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582
|| ||||| ||||| ||||| | ||||| || || ||||| || ||||| || || |||
Sbjct 86349 TCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAAAGAAGGGAG 86408
Query 22583 TTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640
|| | | ||||||| |||| | | || || | |||||||||||| ||
Sbjct 86409 TTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTT--CCAGTCCCACAGGTCAC 86466
Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTT 22700
|| || |||| ||||||| ||| | || | | || || | || || |
Sbjct 86467 TGGGGGTAACAT---CCCACATGTCGAACTGAAGGATACCCTGAGAGACAGGAGAACCCT 86523
Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760
|||| || ||| ||||| | | |||| ||||| |||||| | || |||
Sbjct 86524 CGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGGCAGCGT 86583
Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTC---GGCGGCGGC-GACGCTTTCGTAC 22816
|| || ||||| ||||| | |||||| | | ||| | || ||| || |
Sbjct 86584 GGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGGGCCTCAGCAGAC----TCAAAA 86639
Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876
||||| || | || ||| || || |||| ||||||||| || | |||||| || |||
Sbjct 86640 GGCATGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGG 86699
Query 22877 TTTTTCAGATTCGACACTTTT----GCCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932
| || || || || |||||| | || || ||| ||| || |
Sbjct 86700 TGGCGCATGTTG----CTGTTACGGGCCTCGATAACGGGGTAGTGGTTCACATCAATAAT 86755
Query 22933 TCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC 22992
| ||||||||| | || | || || | | ||||||||
Sbjct 86756 GCGGTTCAAGTTGCGAACAACGACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGGA 86815
Query 22993 GCCCGA-TTGTA--CAACAAA--CTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCC 23047
| ||||| ||||||| | | || || | || || || ||||| |||||
Sbjct 86816 GTTGTTGTTGTAGTCAACAAAGGCAGGAAGA--GCAAGAGAAGCCAGGTTGCACACGGCA 86873
Query 23048 ACCTCGTCTTTGGA-CGT-GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105
||||| || ||| || |||||| | || || || || || ||| || || |
Sbjct 86874 ACCTCATCG--GGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGAATAG 86931
Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165
| |||| || ||||||| || || || ||||| ||||||||| |||||| | ||
Sbjct 86932 TTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGGGT 86991
Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225
| || ||||| ||| | ||| | ||| || ||||| |||| || | || |||
Sbjct 86992 TACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTGGGCCTTAATG-GTC 87050
Query 23226 GCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAA 23284
||| | | || || | |||||||| || | || |||||||| | || ||
Sbjct 87051 AGACGGCCACGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCATAG 87110
Query 23285 CAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCA 23344
||||| |||||||| || | | | || ||||||||| |||| | || || |||
Sbjct 87111 CAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCA 87170
Query 23345 ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACC 23404
|| || |||| || | ||| || ||||| | || ||||| ||||| || || | |
Sbjct 87171 ACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAATC 87230
Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464
||||| || ||| |||||| | ||| | || || ||||| || || |||||||||
Sbjct 87231 TCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACGGC 87290
Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524
|| ||||||| |||||| || || || | ||| || || ||||||||||||||||| ||
Sbjct 87291 TCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTAACGAGCA 87350
Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584
|| |||||| | || | | ||| || || | |||||| || | ||| ||| ||
Sbjct 87351 GTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCCAGCA 87410
Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
| ||||| | || || | ||| |||| || ||| ||||| || || ||
Sbjct 87411 ATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGCCATCTTG 87470
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704
|| ||||| ||||| || || ||||| ||||| || ||||| |||||||| || |
Sbjct 87471 GAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCTTCATG 87530
Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764
| |||||||| || ||||| | || | | ||| ||| | || ||| || || ||
Sbjct 87531 TCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGA 87590
Query 23765 CTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTC--GATGGCG-GCATCA 23821
|| || || ||| | ||||||| || ||||| || || || || || ||
Sbjct 87591 GATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCTCAACA 87650
Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACC 23881
|||| | | | ||||||| || || ||||| ||||||| ||||| | ||| ||
Sbjct 87651 TTGTCACCCCAG---ATACCGACAGCTACACGCATAATCATGTGCTGAGGACGCTCAACA 87707
Query 23882 GTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941
| ||||| || |||| ||||| || | || || || || || ||||| || |
Sbjct 87708 ATCTTGCCGTCAAGCTTGAGAAGATAGGATCTTTCCAAGGTCTTGAAACCAAAGTACTGG 87767
Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
||||| |||||||| || | || ||||||||
Sbjct 87768 TAGTTGAAGTCACGGTCATAGACAATGGCCGA 87799
>seq38
Length=199572
Score = 197 bits (218), Expect = 1e-45
Identities = 595/905 (66%), Gaps = 29/905 (3%)
Strand=Plus/Plus
Query 57505 CCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564
|||| || || || |||||||||| ||| | || || | || || || | || |
Sbjct 76099 CCGACGAGCCCCTCCTGCAAGAGAACCCCAACCGCTTCGTGCTCTTCCCCATCAAGTACC 76158
Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624
|| || ||| | |||||||| ||||| || || || || ||||| | ||| || | |
Sbjct 76159 ATGAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTG 76218
Query 57625 ACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA-----AAGAATCTGAGAGAAATTT 57679
|| |||| |||||||| ||| ||| | || || ||| || || | | | |
Sbjct 76219 ACTTGTCCAAGGATCTTCACGACTGGAACAACCGCATGACCAAGGAT--GA-ACAGTTCT 76275
Query 57680 T-ATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738
| || ||||| | || || ||||| || || || |||||||| |||||||| ||||
Sbjct 76276 TCATCTCTCACGTCCTTGCCTTCTTCGCTGCCTCTGACGGTATTGTCAACGAGAACTTGG 76335
Query 57739 TCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAG 57798
|||| | || || || ||||| | | ||||| | ||||||||||| || ||
Sbjct 76336 TCGAGCGTTTCTCTGCCGAGGTGCAGATTCCCGAGGCCCGCTGCTTTTACGGTTTCCAGA 76395
Query 57799 TGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858
| || || ||| | || || || | ||| || || || |||||||| ||| | ||||
Sbjct 76396 TTATGATGGAGAACATTCACTCGGAGACGTACTCCCTCCTGATCGATACCTACATCAAGG 76455
Query 57859 ACAACGACGAG-AAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG 57917
| | || ||||| ||||||||||| || || || || || ||| |
Sbjct 76456 AGCCTGCTCAGCGCACGTA-CCTGTTCAACGCCATTGATACCATTCCTTGCATCCGCCGC 76514
Query 57918 AAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGG 57974
||||| || ||| | | || ||||| | || || || | || || ||| || |
Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGAT---TACCGACAAGGAGTCGACCTTTGCCCAGCGT 76571
Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034
|| | || || || ||||| || ||||| ||||| || || |||||| | || |||
Sbjct 76572 CTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTT 76631
Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094
||| || || || || |||||||||| |||| || |||||| |||| || ||
Sbjct 76632 TGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGT 76691
Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154
|| |||||||| || || || ||||| ||||| | | ||||||| ||| | |||||
Sbjct 76692 GATGAGGGTCTTCACACCGACTTTGCCTGCCTTCTTTTCTCTCAC-TTG---AACAACCG 76747
Query 58155 AC---GC-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210
| || | | ||| |||||||||||| || || || | ||||| || |||||
Sbjct 76748 CCCTAGCAAGCAGTTGATCCAGGACATTATCACTGATGCCGTTGTTATCGAGAAGGAGTT 76807
Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270
| || || || || || || | || ||||||||| ||| | ||| | ||
Sbjct 76808 CCTTACTGAGGCTCTTCCCTGCGCTCTTCTTGGTATGAACGCTGACCTCATGAAGACTTA 76867
Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAAC 58328
||| ||||| || |||||| | ||| || | | || | || | || |||||
Sbjct 76868 CATCGAGTTCGTCGCCGACCGTCTTCTGGTGGCTCTCGGCAACGACAAGGT--GTACAAG 76925
Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388
| || || || || |||||| | ||||| |||| |||||||| ||||| |||
Sbjct 76926 GCTTCTAACCCCTTCGACTTTATGGAAAACATCTCCCTCGGTGGCAAGACCAACTTCTTC 76985
Query 58389 GAAAA 58393
|| ||
Sbjct 76986 GAGAA 76990
>seq96
Length=85826
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||||||| | || || || |
Sbjct 59496 AAGATGCAGATTTTCGTTAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTCGAGTCT 59437
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 59436 TCGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 59377
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || ||||||||||| ||| |||| ||
Sbjct 59376 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGA 59339
>seq24
Length=264051
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || |||||| | || ||||| | ||
Sbjct 249886 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 249945
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||| || | || || ||||||
Sbjct 249946 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAG 250005
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| ||| | || || || | ||| || |||
Sbjct 250006 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 250065
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || ||||| || || || ||| | || | || ||||
Sbjct 250066 ATTCAGAAGGAGTCTACTCTCCACCTTGTCCTTCGTCTCCGTGGTGGTA 250114
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || || ||| | || || || ||||
Sbjct 250114 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTCGAGTCGTCA 250173
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | ||||| | || ||||||||| || | || || ||||||
Sbjct 250174 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 250233
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||| | || ||||| ||||| ||| | || || ||| | ||||| |||
Sbjct 250234 CAGCGTTTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCGGATTACAAC 250293
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || || |||||||| |||| ||
Sbjct 250294 ATCCAGAAGGAGTCCACTCTTCACTTGGTTCT 250325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764366190800
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