Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq59 86.0 1e-11
seq38 86.0 1e-11
>seq59
Length=151500
Score = 86.0 bits (94), Expect = 1e-11
Identities = 167/244 (68%), Gaps = 6/244 (2%)
Strand=Plus/Plus
Query 94802 TCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTT 94861
|||||||||| || || ||| || || ||||| ||||| || || || || || |
Sbjct 87466 TCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCT 87525
Query 94862 GAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTG 94921
| | | | | |||||| || ||||| ||||| | || ||| || || || |
Sbjct 87526 TCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGG 87585
Query 94922 TGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATT 94981
| || || ||||| || || | | ||||||||||| | || ||||| | ||| |
Sbjct 87586 TAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCT 87645
Query 94982 TGA---TGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCT 95038
| |||| | || || | |||||||| |||||||||||||||| |||||| ||||
Sbjct 87646 CAACATTGTC--ACCCCAGA-TACCGACAGCTACACGCATAATCATGTGCTGAGGACGCT 87702
Query 95039 CAAC 95042
||||
Sbjct 87703 CAAC 87706
>seq38
Length=199572
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||||||||| ||||| || |||||||| |||||| || || || || || |||
Sbjct 76575 GTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTTTGG 76634
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || | ||||| |||| ||| | |||| ||| || ||| | || || | ||
Sbjct 76635 CTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGTGAT 76694
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| |||||||| ||||||||| ||| | || ||
Sbjct 76695 GAGGGTCTTCACACCGACTTTGCCTGCCTTCTTTT 76729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989579372148575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |