Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq59 86.0 1e-11 seq38 86.0 1e-11 >seq59 Length=151500 Score = 86.0 bits (94), Expect = 1e-11 Identities = 167/244 (68%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 94802 TCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTT 94861 |||||||||| || || ||| || || ||||| ||||| || || || || || | Sbjct 87466 TCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCT 87525 Query 94862 GAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTG 94921 | | | | | |||||| || ||||| ||||| | || ||| || || || | Sbjct 87526 TCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGG 87585 Query 94922 TGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATT 94981 | || || ||||| || || | | ||||||||||| | || ||||| | ||| | Sbjct 87586 TAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCT 87645 Query 94982 TGA---TGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCT 95038 | |||| | || || | |||||||| |||||||||||||||| |||||| |||| Sbjct 87646 CAACATTGTC--ACCCCAGA-TACCGACAGCTACACGCATAATCATGTGCTGAGGACGCT 87702 Query 95039 CAAC 95042 |||| Sbjct 87703 CAAC 87706 >seq38 Length=199572 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| ||||| || |||||||| |||||| || || || || || ||| Sbjct 76575 GTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTTTGG 76634 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || | ||||| |||| ||| | |||| ||| || ||| | || || | || Sbjct 76635 CTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGTGAT 76694 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || |||||||| ||||||||| ||| | || || Sbjct 76695 GAGGGTCTTCACACCGACTTTGCCTGCCTTCTTTT 76729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579372148575