Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq59 82.4 7e-11 >seq59 Length=151500 Score = 82.4 bits (90), Expect = 7e-11 Identities = 227/346 (66%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 38107 AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTT 38166 || || ||||| | |||||||||||| || || | ||||| | | || || || | Sbjct 87261 AGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGC 87320 Query 38167 TTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACT 38226 || | ||| ||||||| | || | | | || || || | | | ||||| || || Sbjct 87321 TTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACA 87380 Query 38227 ATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTT 38286 ||||| || || | ||||| | || | || |||| ||| |||| || ||| | Sbjct 87381 ATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGT 87440 Query 38287 A--TCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTAT 38344 | | || | || || ||||| || || || || | |||||| || | || | Sbjct 87441 ACGTTGAGA--CCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGT 87498 Query 38345 CAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAG 38404 || | |||||||| |||||||| ||||| || || | || ||| ||| | || | Sbjct 87499 CATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGG 87558 Query 38405 GCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 || ||||| || ||||| || | |||||||||||||| |||| Sbjct 87559 GCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAA 87604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468522662355600