Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq59 196 6e-45
>seq59
Length=151500
Score = 196 bits (216), Expect = 6e-45
Identities = 639/983 (65%), Gaps = 26/983 (3%)
Strand=Plus/Plus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 65794
|||| ||| ||||| || || ||||| ||||||| | | | ||| || | || |||||
Sbjct 86847 GCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGC-GCAGTACTCGATGATCTC 86905
Query 65795 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 65854
||||||||| || || || ||||| | || | || |||||||| ||| ||
Sbjct 86906 AGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 86965
Query 65855 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 65914
|||||| || || ||||| || ||||||| ||| |||||| || | || || |
Sbjct 86966 GTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATA 87025
Query 65915 CCAGACGACTC-GAGCCTTTATTAT-AGATTTGTATCTCTTTTCTCTTTCGTATAGTGTA 65972
||| | | || | ||||| || | ||| | || | || || |||| |||
Sbjct 87026 CCACA-GCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTT-CGTACTTGGTA 87083
Query 65973 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 66032
|| | || || || || || | | ||| ||||| || || | || |||
Sbjct 87084 TAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCAC 87143
Query 66033 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 66092
|| | | ||| | |||| | || || || ||||| || | |||||||||||| |
Sbjct 87144 ATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAG 87203
Query 66093 GCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 66152
|| | || ||||| | | | | ||||| || || ||||| ||||| |||
Sbjct 87204 GCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGG 87263
Query 66153 AACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 66212
||| | | | |||| |||||||| |||| ||| ||||| | | | || || || |||
Sbjct 87264 AACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTG 87323
Query 66213 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 66272
|| || |||||||| | ||| | ||| || || || | || | |||||| |||| ||||
Sbjct 87324 TTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATA 87383
Query 66273 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATA----TTACT 66328
|| || || ||||| ||||| || | || || ||| | ||||| ||| |||
Sbjct 87384 CCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTAC- 87442
Query 66329 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 66388
||| ||||| || || || ||||| || ||||| | ||||| || | || ||
Sbjct 87443 -GTTG--AGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTC 87499
Query 66389 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 66448
|||||| || || ||||| || ||| |||||| | | || || ||| | ||| |
Sbjct 87500 ATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGG 87559
Query 66449 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 66508
| ||| || || || || | ||||||||| || || || || | || || |
Sbjct 87560 CTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACAT 87619
Query 66509 TAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGC 66562
|| ||||| || || | | | || | || |||| || || || ||
Sbjct 87620 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCA------GATACCGACAGC 87673
Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622
|||||||| | |||||||||||| | ||||| |||||| || | || | | ||
Sbjct 87674 TACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATA 87733
Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682
|||| ||||||| || || |||||||| || | ||| ||||| || || || | |||
Sbjct 87734 GGATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAAT 87793
Query 66683 AACCGAGTTGAGTTTATCCTTAT 66705
|||||| || | |||||||
Sbjct 87794 GGCCGAGTCCAGCTCTTCCTTAT 87816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658169797086600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |