Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq59 192 8e-44
seq38 159 5e-34
>seq59
Length=151500
Score = 192 bits (212), Expect = 8e-44
Identities = 635/978 (65%), Gaps = 26/978 (3%)
Strand=Plus/Plus
Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGC 79678
||| ||||| || || ||||| ||||||| | | | ||| || | || || |||||||
Sbjct 86852 AGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGC-GCAGTACTCGATGATCTCAGTGC 86910
Query 79679 AGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 79738
| ||||| || ||| ||||| | || | || |||||||| ||| || ||
Sbjct 86911 AAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGAT 86970
Query 79739 CCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 79798
|||| || || ||||| || ||||||| ||| |||||| || | || || | ||| |
Sbjct 86971 CCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACA 87030
Query 79799 CGACTC-GAGCCTTTATTAT-AGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAA 79856
| || | ||||| || | |||| | || | || || |||| | ||||| |
Sbjct 87031 -GCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTT-CGTACTTGGTATAGAG 87088
Query 79857 TCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAA 79916
|| || || || || | || | | ||||| || |||| || ||||| |
Sbjct 87089 AGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAG 87148
Query 79917 CGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 79976
| ||| | || | | || || || ||||| || | |||||||||||| | || |
Sbjct 87149 AGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAG 87208
Query 79977 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 80036
|| | ||| | | | | |||||| || || ||||| ||||| |||||| |
Sbjct 87209 GAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTC 87268
Query 80037 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCC 80096
| | ||||| |||||||| |||| ||| ||||| | | | || || || ||||| ||
Sbjct 87269 GAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACC 87328
Query 80097 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 80156
|||||||| | ||| | ||| || || || | || | |||||| |||| |||||| ||
Sbjct 87329 ACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTT 87388
Query 80157 GGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA----TTACTAATTG 80212
|| ||||| ||||| || | || || ||| | ||||| ||| ||| |||
Sbjct 87389 CGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTAC--GTTG 87446
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
||||| || || || ||||| || ||||| | ||||| || | || |||||||
Sbjct 87447 --AGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGA 87504
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || || || || || |||||| | | || || ||| | ||| | |
Sbjct 87505 TACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGG 87564
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392
||| || || || || | ||||||||| || || || || | || |||| || |
Sbjct 87565 GAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGT 87624
Query 80393 TGTACGTCTCAATAGCTGATTCTATAT------CCCATTGATGAATTCCTACCGCGACAC 80446
|||| || || | | | || | || |||| || || || || ||||
Sbjct 87625 TGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCA------GATACCGACAGCTACAC 87678
Query 80447 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATT 80506
|||| | |||||||||||| | ||||| |||||| | | || | | || |||
Sbjct 87679 GCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGATC 87738
Query 80507 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 80566
||||||| || || |||||||| || | ||| ||||| || || || | ||| |||
Sbjct 87739 TTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCCG 87798
Query 80567 AGTTGAGTTTATCCTTAT 80584
||| || | |||||||
Sbjct 87799 AGTCCAGCTCTTCCTTAT 87816
>seq38
Length=199572
Score = 159 bits (176), Expect = 5e-34
Identities = 383/578 (66%), Gaps = 6/578 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||| |||||||| || | || || ||||| || || || |
Sbjct 76720 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAA 76661
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| | |||||||| |||||||| || || ||||| | ||||| ||||||
Sbjct 76660 CCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAG 76601
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136
|| || || || || ||||||||||| || | || || | | | | ||||
Sbjct 76600 ATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCCTTGTCGGTA 76541
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||||||| | ||||| |||||||| | ||||| || || || ||||| ||
Sbjct 76540 ATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTG 76481
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
|| || || | | | | || || | || |||||||||| || ||| |
Sbjct 76480 AACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTC 76421
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
||||| |||||||| || || ||||| || ||||| || || | ||||||| ||||
Sbjct 76420 TCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATC 76361
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
||||| || | | | || || || | || || || || || || |||||| ||| ||
Sbjct 76360 TGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCG 76301
Query 50377 AAAAACGCCAATACATG---TTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAA 50433
|| || || | || || | | || |||| || |||| | | || |||||
Sbjct 76300 AAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTTCCAG 76241
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | | ||| || || | || | || || | ||||| || || ||||| |||||
Sbjct 76240 TCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 76181
Query 50494 TTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531
|| ||||| | |||||| ||||| || | ||| |||||
Sbjct 76180 TTGTACATTTGCCAGATCTCATGGTACTTGATGGGGAA 76143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265522898600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |