Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq59 176 6e-39
seq38 145 1e-29
>seq59
Length=151500
Score = 176 bits (194), Expect = 6e-39
Identities = 633/981 (65%), Gaps = 22/981 (2%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| ||| ||||| || || ||||| ||||||| | | || || | || || |||
Sbjct 86847 GCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTACTCGATGATCTCA 86906
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
|||||||| || || || ||||| | || | || |||||||| ||| ||
Sbjct 86907 GTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAG 86966
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|||||| || || || || || ||||||| ||| |||||| || | || || | |
Sbjct 86967 TGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATAC 87026
Query 71878 CAGACGACTC-GAGCCTTTATTAT-ATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTAT 71935
|| | | || | ||||| || | | | | || | || || |||| | ||||
Sbjct 87027 CACA-GCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTT-CGTACTTGGTAT 87084
Query 71936 ATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCATTCGGACAC 71994
| | || || || || || | ||| | | | ||||| || || || || |||
Sbjct 87085 AGAGAGCCTCAAATTCATCGCCATA-GCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCAC 87143
Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 72054
|| | | ||| | || | | | || || ||||| || | |||||||||||| |
Sbjct 87144 ATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAG 87203
Query 72055 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114
|| | || | ||| | | | | |||||| || || ||||| ||||| |||
Sbjct 87204 GCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGG 87263
Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174
||| | | | ||||| |||||||| |||| ||| ||||| | | | || || || |||
Sbjct 87264 AACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTG 87323
Query 72175 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 72234
|| || |||||||| | ||| | ||| || || || | || | |||||| |||| ||||
Sbjct 87324 TTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATA 87383
Query 72235 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTGCTAA 72292
|| || || | ||| ||||| || | || || ||| | ||||| ||| ||
Sbjct 87384 CCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACG 87443
Query 72293 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCAT 72352
||| ||||| || || || ||||| || ||||| | ||||| || | || ||||
Sbjct 87444 TTG--AGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCAT 87501
Query 72353 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412
|||| || || ||||| || ||| |||||| | | || || ||| | ||| |
Sbjct 87502 AGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCT 87561
Query 72413 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTA 72472
| ||| || || || || | ||||||||| || || || || | || |||| |
Sbjct 87562 GGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATGA 87621
Query 72473 GATTGTACGTCTCAATAGCTGATTCTATAT------CCCATTGATGTATTCCTACCGCGA 72526
| ||||| || || | | | || | || |||| || || || || |
Sbjct 87622 GGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCA------GATACCGACAGCTA 87675
Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586
||||||| | ||| |||||||| | ||||| |||||| | | || | | ||||
Sbjct 87676 CACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGG 87735
Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 72646
|| ||||||| || || |||||||| || | ||| ||||| || || || | |||
Sbjct 87736 ATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGG 87795
Query 72647 CCGAATTGAGTTTATCCTTAT 72667
|||| | || | |||||||
Sbjct 87796 CCGAGTCCAGCTCTTCCTTAT 87816
>seq38
Length=199572
Score = 145 bits (160), Expect = 1e-29
Identities = 382/579 (66%), Gaps = 8/579 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || || ||| ||| ||||||||||| | || | ||||| || || || |
Sbjct 76720 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAA 76661
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| | |||||||| |||||||| ||||| ||||| | ||||| ||||||
Sbjct 76660 CCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAG 76601
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTCATGT 42241
|| || || || || |||||||||| || | || || | || | | ||||
Sbjct 76600 ATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCCTTGTCGGTA 76541
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||||| | ||||| |||||||| | ||||| || || || ||||| ||
Sbjct 76540 ATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTG 76481
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
|| || || | | | | || || | || |||||||||| || ||| |
Sbjct 76480 AACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTC 76421
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| || |||||||| || || ||||| || ||||| || || | |||||||| || |
Sbjct 76420 TCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATC 76361
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || || | | | || || || | || || ||||| || || |||||| ||| ||
Sbjct 76360 TGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCG 76301
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCA 42537
|| || || | || || || || | | ||| ||| || | || || |||||
Sbjct 76300 AAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCC-TTGGTCATGCGGTTGTTCCA 76242
Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597
|| | | ||| || || | || | || || | ||||| || || || || |||||
Sbjct 76241 GTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTT 76182
Query 42598 TTTATACATATTCCAGATATCATGATATTGAATTGGGAA 42636
|| ||||| | |||||| ||||| || | || |||||
Sbjct 76181 CTTGTACATTTGCCAGATCTCATGGTACTTGATGGGGAA 76143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671136137927400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |