Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq24 93.3 4e-14
>seq24
Length=264051
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| || ||||| ||| |||||| || ||||||||||| | | || | |||||
Sbjct 250322 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTACGGCCATCCTCA 250263
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
|||||||| ||| || |||| ||||||||||| ||| || | || |||||||||
Sbjct 250262 AGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 250203
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| || ||||| | | |||||||| | ||||| ||| | || ||||| ||
Sbjct 250202 ATCTTGGACTTGACATTGTCGATGGTATCTGACGACTCGACCTCAAGGGTAATGGTCTTG 250143
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || || || || || || ||||||||
Sbjct 250142 CCAGTCAGGGTCTTGACGAAGATCTGCAT 250114
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| || |||||||| |||| || || ||||||||||||||
Sbjct 250544 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGC 250485
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
||||| | | || | ||||||||| || || | || ||||||||| || ||
Sbjct 250484 TTACCAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTG 250425
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | |||||||| | |||||| || | || ||||| || || |||
Sbjct 250424 CTCTTCACGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTCTTTCCAGTG 250365
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
||||| ||||| || ||||||||
Sbjct 250364 AGAGTCTTCACGAAGATCTGCAT 250342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249326090365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |