Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq24 98.7 9e-16
seq14 82.4 7e-11
>seq24
Length=264051
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | |||||| ||||| || | ||| || ||| | ||| | |||||| |||||
Sbjct 250089 GTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTG 250030
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || | || || | | ||||| || ||||||||||| || ||||| | || ||
Sbjct 250029 CTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 249970
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
| ||| ||| | | | ||||||| | || || |||| |||||||| || |||||
Sbjct 249969 GGACTTCACGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 249910
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||||||||||||
Sbjct 249909 CAGGGTCTTGACAAAGATCTGCAT 249886
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| || ||||| || | ||| || || || || | ||||||
Sbjct 250550 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCC 250491
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || ||||||| | | ||||| || || || ||||| || ||||| |
Sbjct 250490 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGG 250431
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||| ||| | | | || |||| ||||| |||| |||||||| |||
Sbjct 250430 ATCTTGCTCTTCACGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTCTTT 250371
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| ||||| |||||||||||
Sbjct 250370 CCAGTGAGAGTCTTCACGAAGATCTGCAT 250342
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | ||| || ||||| || | ||| ||||| | ||| | ||||||
Sbjct 250322 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTACGGCCATCCTCA 250263
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| | || || || | ||||| || || || ||||| || ||||| |
Sbjct 250262 AGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 250203
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | |||||| | ||| || || | ||||| |||| || ||||| ||
Sbjct 250202 ATCTTGGACTTGACATTGTCGATGGTATCTGACGACTCGACCTCAAGGGTAATGGTCTTG 250143
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || || || |||||||||||
Sbjct 250142 CCAGTCAGGGTCTTGACGAAGATCTGCAT 250114
>seq14
Length=289536
Score = 82.4 bits (90), Expect = 7e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | ||| || ||||| || | ||| || || || ||| | ||||||
Sbjct 256417 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCA 256358
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || | ||||| | | ||||| || ||||||||||| || ||||| |
Sbjct 256357 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGG 256298
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||||| | ||| ||||| | | ||||| || | |||||||| ||
Sbjct 256297 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTA 256238
Query 94979 CCAGTAAGAGTTTTCACAAA 94998
|| || || || || || ||
Sbjct 256237 CCCGTCAGGGTCTTGACGAA 256218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289154671400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |