Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq59 205 1e-47
seq38 150 2e-31
>seq59
Length=151500
Score = 205 bits (226), Expect = 1e-47
Identities = 641/983 (65%), Gaps = 26/983 (3%)
Strand=Plus/Plus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 62950
|||| ||| ||||| || || ||||| ||||||| | | | ||| || | || |||||
Sbjct 86847 GCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGC-GCAGTACTCGATGATCTC 86905
Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010
||||||||| || || |||||||| | || | || |||||||| ||| ||
Sbjct 86906 AGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 86965
Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070
|||||| || || ||||| || ||||||| ||| |||||| || | || || |
Sbjct 86966 GTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATA 87025
Query 63071 CCAGACGACTC-GAGCCTTTATTAT-AGATTTGTATCTCCTTTCTCTTTCGTATAGTGTA 63128
||| | | || | ||||| || | ||| | ||| | || || |||| |||
Sbjct 87026 CCACA-GCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTT-CGTACTTGGTA 87083
Query 63129 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 63188
|| | || || || || || | | ||| ||||| || || | || |||
Sbjct 87084 TAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCAC 87143
Query 63189 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63248
|| | | ||| | |||| | || || || ||||| || | |||||||||||| |
Sbjct 87144 ATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAG 87203
Query 63249 GCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63308
|| | || | ||| | | | | ||||| || || ||||| ||||| |||
Sbjct 87204 GCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGG 87263
Query 63309 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63368
||| | | | ||||| |||||||| |||| ||| ||||| | | | || || || |||
Sbjct 87264 AACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTG 87323
Query 63369 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63428
|| || |||||||| | ||| | ||| || || || | || | |||||| |||| ||||
Sbjct 87324 TTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATA 87383
Query 63429 CCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT----TACT 63484
||||| || |||| ||||| || | || || ||| | ||||| ||| |||
Sbjct 87384 CCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACG 87443
Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63544
|||| |||| || || || ||||| || ||||| | ||||| || | |||||
Sbjct 87444 --TTGA--GACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTC 87499
Query 63545 ATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604
||||||||| || || || || || |||||| | | || || ||| | ||| |
Sbjct 87500 ATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGG 87559
Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63664
| ||| || || || || | ||||||||| || || || || | || || |
Sbjct 87560 CTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACAT 87619
Query 63665 TAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGC 63718
|| ||||| || || | | | || | || |||| || || || ||
Sbjct 87620 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCA------GATACCGACAGC 87673
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | |||||||||||| | ||||| |||||| || | || | | ||
Sbjct 87674 TACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATA 87733
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
|||| ||||||| || || |||||||| || | ||| ||||| || || || | |||
Sbjct 87734 GGATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAAT 87793
Query 63839 AACCGAGTTGAGTTTATCCTTAT 63861
|||||| || | |||||||
Sbjct 87794 GGCCGAGTCCAGCTCTTCCTTAT 87816
>seq38
Length=199572
Score = 150 bits (166), Expect = 2e-31
Identities = 383/578 (66%), Gaps = 6/578 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| || || ||| ||| |||||||| || | || || ||||| || || || |
Sbjct 76720 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAA 76661
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|||||||| | |||||||| |||||||| || || || || | ||||| ||||||
Sbjct 76660 CCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAG 76601
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGC--TGTCATGT 33480
|| || || || ||||||||||||| || | || || | || | | ||||
Sbjct 76600 ATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCCTTGTCGGTA 76541
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||||| | ||||| |||||||| | ||||| || || || ||||| ||
Sbjct 76540 ATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTG 76481
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
|| || || | | | | || || | || |||||||||| || ||| |
Sbjct 76480 AACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTC 76421
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
||||| |||||||| || || ||||| || ||||| || || | ||||||| ||||
Sbjct 76420 TCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATC 76361
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | | | || || || |||| || || || || || |||||| ||| ||
Sbjct 76360 TGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCG 76301
Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAA 33777
|| || || | || || || || | | ||| || |||| | | || |||||
Sbjct 76300 AAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTTCCAG 76241
Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837
|| | | ||| || || | || | || || | ||||| || || ||||| |||||
Sbjct 76240 TCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 76181
Query 33838 TTATACATGTTCCAGATGTCATAATATTGGATTGGGAA 33875
|| ||||| | |||||| |||| || | ||| |||||
Sbjct 76180 TTGTACATTTGCCAGATCTCATGGTACTTGATGGGGAA 76143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622944357803400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |