Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq59 84.2 2e-11 >seq59 Length=151500 Score = 84.2 bits (92), Expect = 2e-11 Identities = 305/465 (66%), Gaps = 13/465 (3%) Strand=Plus/Plus Query 148270 CCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATG 148329 |||| ||||| | ||||||||| || | || || ||||||| ||||||||| | | Sbjct 87091 CCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAG 87150 Query 148330 ACCATTTCCC-TCCTGTCTTTACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAA 148388 ||| || || | || ||| || | |||||| |||| |||||| |||||| ||||| Sbjct 87151 TCCAGTTGCCGTTCT-TCTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGG 87209 Query 148389 AGAAGATCGCGAGCCTTCATATCCTCGGCACCCATATTGCGCTTTAGATCCaaaaaagta 148448 | | ||||||||| || ||||| ||| || | ||||| | || Sbjct 87210 AACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCG 87269 Query 148449 aaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTCATGGCGCCTTTCC---TTTTACCT 148505 || || || |||||||| ||||| | ||| | || | || || | | ||||| Sbjct 87270 AACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCA 87329 Query 148506 CCTTGATCGACATGGCGTAGCA-TGCTATTAAAAACACGCAATGCA-GGTCCCAATCCCG 148563 || |||||||| | || |||| | | || || |||||||| || || |||| ||| Sbjct 87330 CCCTGATCGACGTAACG-AGCAGTATTGTTGAAGACACGCAA--CATGGGAACAATACCG 87386 Query 148564 C-CGCAGTTCCGTTTGTGGATTCAATTTTACTATTGGTGGCGCGAATTTGAGTG-ACATT 148621 || || ||||| ||| |||| | | | || || || || | ||| || || Sbjct 87387 TTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACG-GTGTACGTT 87445 Query 148622 CAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTGTTTTATAGAT 148681 || || ||||| || | || || ||||| || ||| ||||| || | |||||| Sbjct 87446 GAGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGAT 87505 Query 148682 GCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGA 148726 || | ||||||||||| | |||| | || | |||| || || Sbjct 87506 ACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGA 87550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660216102800