Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq59 425 1e-113 seq38 109 1e-18 >seq59 Length=151500 Score = 425 bits (470), Expect = 1e-113 Identities = 1151/1736 (66%), Gaps = 34/1736 (2%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||||||| || || ||||| ||| | |||||||| ||| | |||||| | || Sbjct 87709 ATTGTTGAGCGTCCTCAGCACATGATTATGCGTGTAGCTGTCGGTATCTGGGGTGACAAT 87650 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCAC 363560 ||||| | | ||||| || || || | | || || | ||||| || || | Sbjct 87649 GTTGAGCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGT-TCTTCACTCATGCATC 87591 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 || || | | ||| ||||| |||| | || ||| | ||||||||||| | || | Sbjct 87590 TCCTACCCTCTTCAACGCTGGTACTCCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGA 87531 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 |||||||| || ||||| ||||||| |||||| || |||| ||| ||| | || || Sbjct 87530 CATGAAGGAGGACAGTATCGAAGGTATCTATGACACCCTCAAGACTTGCGCTATGATCTC 87471 Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738 ||||| || || || |||||| | | || | ||| | | ||||| || | |||| Sbjct 87470 CAAGATGGCGGGTGGCATTGGTCTCAACG-TACACCGTATCCGTGCTACTGGTTC-TTAC 87413 Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 ||| ||||| || |||||| || | ||||||||| | ||||| || ||||| Sbjct 87412 ATTGCTGGCACCAACGGTACCTCGAACGGTATTGTTCCCATGTTGCGTGTCTTCAACAAT 87353 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||||| | |||||||| |||||||| ||||| || || ||||| || || || Sbjct 87352 ACTGCTCGTTACGTCGATCAGGGTGGTAACAAGCGTCCCGGTGCTTTTGCCATTTACCTG 87293 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| || || ||| | || ||||| ||||| |||||||| ||| || || ||| Sbjct 87292 GAGCCGTGGCACGCTGATGTGTTCGAGTTCCTTGATCTCCGGAAGAACCACGGTAAGGAG 87233 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 || | ||||| || ||| ||||| ||| | ||| || |||| || |||||||| Sbjct 87232 GAGATTCGTGCTCGCGATTTGTTCCTTGCCTTGTGGATTCCTGATTTGTTCATGAAGCGT 87173 Query 363979 GTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCG 364036 || ||| | | | | || ||| | ||| | ||||| |||| || || || || | | Sbjct 87172 GTTGAG--AAGAACGGCAACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTG 87115 Query 364037 A-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 | || ||||| | | || | || ||||| || ||||| ||| ||||||| | Sbjct 87114 ACTGCTATGGCG--ATGAATTTGAGGCTCTCTATACCAAGTACGAACAGGAGGGACGTGG 87057 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||| ||| ||| || |||||||| |||| ||| ||| |||| | |||| |||||| Sbjct 87056 CCGTCTGACCATTAAGGCCCAGAAGCTGTGGTATGCTATCTTGGAGGCTCAGACTGAGAC 86997 Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 || | ||||| | ||| ||||||| ||| |||||||||||| |||||| || ||| Sbjct 86996 TGGTA-ACCCTTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACC 86938 Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 | || || |||| |||| |||||| || || ||||| || || ||| ||||||||| Sbjct 86937 TGGGAACTATTC-GCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGCGCTCCCGAT 86879 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAGATG 364327 ||| |||||| || ||||| || || | || ||||| || |||| || || | Sbjct 86878 GAGGTTGCCGTGTGCAACCTGGCTTCTCTTGCTCTTCCTGCCTTTGTTGACTACAACA-A 86820 Query 364328 GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385 ||| | ||| |||| | || | || || ||| | | | | |||| | | Sbjct 86819 CAACTCCTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTCGTTGTTCGCAACTTGAA 86760 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT---TCTAATATGCG 364442 | |||| || ||| | || || || || ||| ||| || ||||| Sbjct 86759 CCGCATTATTGATGTGAACCACTACCCCGTTATCGAGGCC---CGTAACAGCAACATGCG 86703 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502 || ||||| || ||| ||||||| ||||| || ||||| | || || || || Sbjct 86702 CCACCGCCCCATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCTGGCCCTTCGCAT 86643 Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562 | | ||||| || |||| || ||| || || ||| |||||||||| || || || Sbjct 86642 GCCTTTTGAGTCTGCTGAGGCCCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCA 86583 Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622 || || | || ||||| ||| | || | | || ||||| || || || Sbjct 86582 CGCTGCCCTCGAGGCGTCGTGCGATATTGCTATTCTTGAAGGTCCCTACTCGACCTACGA 86523 Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682 ||| || ||| | || ||||| | | ||||| || | ||| |||| || || || Sbjct 86522 GGGTTCTCCTGTCTCTCAGGGTATCCTTCAGTTCGACATGTGGGATGTTACCCCCAGTGA 86463 Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCC 364741 || ||| ||||| | | | | | || | | ||| |||| ||| ||||||||||| Sbjct 86462 CCTGTGGGACTGGAACTCTTTGAAGGACC-AGATCAAGCAGCACGGTGTTCGCAACTCCC 86404 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 | || || || |||||||| || || || | ||||| || || ||||||||||||| Sbjct 86403 TTCTTTTGGCCCCTATGCCCACAGCCTCGACGTCCCAGATTCTGGGTAACAACGAGTGCT 86344 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 |||| || | || ||| |||| ||||| || | | || || || | ||| | Sbjct 86343 TCGAGCCTTACACTTCCAACATTTACCAGCGCCGTGTGTTGGCTGGTGAGTTCCAGGTTG 86284 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 | || || | | || || |||| || |||||| |||| |||||||| Sbjct 86283 TCAACCCGTGGTTGCTTCGTGACCTGGTTGACCTTGGTCTGTGGTCCGACAACATGAAGA 86224 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981 || |||||| ||| || |||||| | |||||||| || | |||| | || | | Sbjct 86223 ACCGTATCATTTCCGACAACGGTTCTATCCAGAACATCCCCAGCATTCCTGCTGACATCA 86164 Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041 || || | ||||| || || ||||| ||||| ||| ||| | || | |||||||||| Sbjct 86163 AGTCTCTGTACAAGACGGTTTGGGAGATTTCTCAGCGCACTGTTGTTCAAATGGCGGCCG 86104 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 |||| ||||| ||||| |||| |||||||| ||| | ||||| | || ||| Sbjct 86103 ATCGTGGTGCCTTTATTGATCAGTCTCAGTCGTTGAACATTCACATGAAGGACCCTACCA 86044 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 | ||| | || |||||| ||| ||| ||||| |||||| ||||| ||| Sbjct 86043 TGGGTAAGATCACCAGCATGCACTTCGCCGGTTGGAAGCTCGGTCTCAAGACGGGT 85988 >seq38 Length=199572 Score = 109 bits (120), Expect = 1e-18 Identities = 148/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTT 22497 ||||| || ||||| ||||| ||||| | |||| || | || || | ||||| Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAGTCGACCTTTGCCCAGCGTCTG 76574 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 |||| ||||||| ||||| || || ||||| ||||| || ||| | ||||||||| Sbjct 76575 GTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTTTGG 76634 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 || || |||| || ||||| ||| | || || ||||| ||| | || ||| ||| Sbjct 76635 CTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGTGAT 76694 Query 22618 GAGGGTCTTCATACCGATTTTGCGTG 22643 ||||||||||| ||||| ||||| || Sbjct 76695 GAGGGTCTTCACACCGACTTTGCCTG 76720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347504785430