Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq59 425 1e-113
seq38 109 1e-18
>seq59
Length=151500
Score = 425 bits (470), Expect = 1e-113
Identities = 1151/1736 (66%), Gaps = 34/1736 (2%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||||||| || || ||||| ||| | |||||||| ||| | |||||| | ||
Sbjct 87709 ATTGTTGAGCGTCCTCAGCACATGATTATGCGTGTAGCTGTCGGTATCTGGGGTGACAAT 87650
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCAC 363560
||||| | | ||||| || || || | | || || | ||||| || || |
Sbjct 87649 GTTGAGCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGT-TCTTCACTCATGCATC 87591
Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620
|| || | | ||| ||||| |||| | || ||| | ||||||||||| | || |
Sbjct 87590 TCCTACCCTCTTCAACGCTGGTACTCCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGA 87531
Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680
|||||||| || ||||| ||||||| |||||| || |||| ||| ||| | || ||
Sbjct 87530 CATGAAGGAGGACAGTATCGAAGGTATCTATGACACCCTCAAGACTTGCGCTATGATCTC 87471
Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738
||||| || || || |||||| | | || | ||| | | ||||| || | ||||
Sbjct 87470 CAAGATGGCGGGTGGCATTGGTCTCAACG-TACACCGTATCCGTGCTACTGGTTC-TTAC 87413
Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798
||| ||||| || |||||| || | ||||||||| | ||||| || |||||
Sbjct 87412 ATTGCTGGCACCAACGGTACCTCGAACGGTATTGTTCCCATGTTGCGTGTCTTCAACAAT 87353
Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858
||||| | |||||||| |||||||| ||||| || || ||||| || || ||
Sbjct 87352 ACTGCTCGTTACGTCGATCAGGGTGGTAACAAGCGTCCCGGTGCTTTTGCCATTTACCTG 87293
Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918
||||| || || ||| | || ||||| ||||| |||||||| ||| || || |||
Sbjct 87292 GAGCCGTGGCACGCTGATGTGTTCGAGTTCCTTGATCTCCGGAAGAACCACGGTAAGGAG 87233
Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978
|| | ||||| || ||| ||||| ||| | ||| || |||| || ||||||||
Sbjct 87232 GAGATTCGTGCTCGCGATTTGTTCCTTGCCTTGTGGATTCCTGATTTGTTCATGAAGCGT 87173
Query 363979 GTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCG 364036
|| ||| | | | | || ||| | ||| | ||||| |||| || || || || | |
Sbjct 87172 GTTGAG--AAGAACGGCAACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTG 87115
Query 364037 A-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094
| || ||||| | | || | || ||||| || ||||| ||| ||||||| |
Sbjct 87114 ACTGCTATGGCG--ATGAATTTGAGGCTCTCTATACCAAGTACGAACAGGAGGGACGTGG 87057
Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154
||| ||| ||| || |||||||| |||| ||| ||| |||| | |||| ||||||
Sbjct 87056 CCGTCTGACCATTAAGGCCCAGAAGCTGTGGTATGCTATCTTGGAGGCTCAGACTGAGAC 86997
Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
|| | ||||| | ||| ||||||| ||| |||||||||||| |||||| || |||
Sbjct 86996 TGGTA-ACCCTTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACC 86938
Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
| || || |||| |||| |||||| || || ||||| || || ||| |||||||||
Sbjct 86937 TGGGAACTATTC-GCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGCGCTCCCGAT 86879
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAGATG 364327
||| |||||| || ||||| || || | || ||||| || |||| || || |
Sbjct 86878 GAGGTTGCCGTGTGCAACCTGGCTTCTCTTGCTCTTCCTGCCTTTGTTGACTACAACA-A 86820
Query 364328 GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385
||| | ||| |||| | || | || || ||| | | | | |||| | |
Sbjct 86819 CAACTCCTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTCGTTGTTCGCAACTTGAA 86760
Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT---TCTAATATGCG 364442
| |||| || ||| | || || || || ||| ||| || |||||
Sbjct 86759 CCGCATTATTGATGTGAACCACTACCCCGTTATCGAGGCC---CGTAACAGCAACATGCG 86703
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502
|| ||||| || ||| ||||||| ||||| || ||||| | || || || ||
Sbjct 86702 CCACCGCCCCATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCTGGCCCTTCGCAT 86643
Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562
| | ||||| || |||| || ||| || || ||| |||||||||| || || ||
Sbjct 86642 GCCTTTTGAGTCTGCTGAGGCCCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCA 86583
Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622
|| || | || ||||| ||| | || | | || ||||| || || ||
Sbjct 86582 CGCTGCCCTCGAGGCGTCGTGCGATATTGCTATTCTTGAAGGTCCCTACTCGACCTACGA 86523
Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682
||| || ||| | || ||||| | | ||||| || | ||| |||| || || ||
Sbjct 86522 GGGTTCTCCTGTCTCTCAGGGTATCCTTCAGTTCGACATGTGGGATGTTACCCCCAGTGA 86463
Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCC 364741
|| ||| ||||| | | | | | || | | ||| |||| ||| |||||||||||
Sbjct 86462 CCTGTGGGACTGGAACTCTTTGAAGGACC-AGATCAAGCAGCACGGTGTTCGCAACTCCC 86404
Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801
| || || || |||||||| || || || | ||||| || || |||||||||||||
Sbjct 86403 TTCTTTTGGCCCCTATGCCCACAGCCTCGACGTCCCAGATTCTGGGTAACAACGAGTGCT 86344
Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861
|||| || | || ||| |||| ||||| || | | || || || | ||| |
Sbjct 86343 TCGAGCCTTACACTTCCAACATTTACCAGCGCCGTGTGTTGGCTGGTGAGTTCCAGGTTG 86284
Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921
| || || | | || || |||| || |||||| |||| ||||||||
Sbjct 86283 TCAACCCGTGGTTGCTTCGTGACCTGGTTGACCTTGGTCTGTGGTCCGACAACATGAAGA 86224
Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981
|| |||||| ||| || |||||| | |||||||| || | |||| | || | |
Sbjct 86223 ACCGTATCATTTCCGACAACGGTTCTATCCAGAACATCCCCAGCATTCCTGCTGACATCA 86164
Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041
|| || | ||||| || || ||||| ||||| ||| ||| | || | ||||||||||
Sbjct 86163 AGTCTCTGTACAAGACGGTTTGGGAGATTTCTCAGCGCACTGTTGTTCAAATGGCGGCCG 86104
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
|||| ||||| ||||| |||| |||||||| ||| | ||||| | || |||
Sbjct 86103 ATCGTGGTGCCTTTATTGATCAGTCTCAGTCGTTGAACATTCACATGAAGGACCCTACCA 86044
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157
| ||| | || |||||| ||| ||| ||||| |||||| ||||| |||
Sbjct 86043 TGGGTAAGATCACCAGCATGCACTTCGCCGGTTGGAAGCTCGGTCTCAAGACGGGT 85988
>seq38
Length=199572
Score = 109 bits (120), Expect = 1e-18
Identities = 148/206 (72%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTT 22497
||||| || ||||| ||||| ||||| | |||| || | || || | |||||
Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAGTCGACCTTTGCCCAGCGTCTG 76574
Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557
|||| ||||||| ||||| || || ||||| ||||| || ||| | |||||||||
Sbjct 76575 GTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTTTGG 76634
Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617
|| || |||| || ||||| ||| | || || ||||| ||| | || ||| |||
Sbjct 76635 CTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGTGAT 76694
Query 22618 GAGGGTCTTCATACCGATTTTGCGTG 22643
||||||||||| ||||| ||||| ||
Sbjct 76695 GAGGGTCTTCACACCGACTTTGCCTG 76720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303347504785430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |