Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq24 96.9 3e-15
seq14 84.2 2e-11
>seq24
Length=264051
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||||| | ||| | | ||||| | ||
Sbjct 250088 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGC 250029
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || |||| || ||||| |||||| ||| | ||||| ||||| || |
Sbjct 250028 TTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTG 249969
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | | | ||||| || ||| || | ||||||||| || || |||
Sbjct 249968 GACTTCACGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTC 249909
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || |||||||| ||||||||
Sbjct 249908 AGGGTCTTGACAAAGATCTGCAT 249886
Score = 95.1 bits (104), Expect = 1e-14
Identities = 165/237 (70%), Gaps = 5/237 (2%)
Strand=Plus/Minus
Query 16703 ATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTG 16759
|||||| || || || || | || |||| || || ||||||||||| || ||||||
Sbjct 250577 ATTTACTGGCCACCACGAAGACGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTG 250518
Query 16760 TAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGG 16819
||||| | || ||| | ||||||||| || || || ||| | ||||| ||||| |||
Sbjct 250517 TAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGG 250458
Query 16820 TCCACAGGCACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878
|| || | ||||| |||| | | | ||||| |||||| | | | | || ||
Sbjct 250457 TCGGGGGGGATACCCTCCTTGTCCTGGATCTTGCT-CTTCACGTTGTCAATGGTATCAGA 250399
Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| ||| ||| | |||||||| ||||| || || || || || || ||||||||
Sbjct 250398 AGACTCGACTTCAAGAGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAGATCTGCAT 250342
>seq14
Length=289536
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||| | || ||| | | |||
Sbjct 256420 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 256361
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || ||||| || | || || ||||| |||||| ||| | ||||| |||||
Sbjct 256360 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 256301
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | ||| || | | | | ||||| || ||| |||| |||||||||
Sbjct 256300 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAGGGTGATGGTC 256241
Query 16904 TTTCCGGTCAGCGTTTTGACAAAA 16927
|| || ||||| || ||||| |||
Sbjct 256240 TTACCCGTCAGGGTCTTGACGAAA 256217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405086197991350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |