Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq59 205 1e-47
>seq59
Length=151500
Score = 205 bits (226), Expect = 1e-47
Identities = 641/983 (65%), Gaps = 26/983 (3%)
Strand=Plus/Plus
Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTC 62805
|||| ||| ||||| || || ||||| ||||||| | | | ||| || | || |||||
Sbjct 86847 GCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGC-GCAGTACTCGATGATCTC 86905
Query 62806 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 62865
||||||||| || || || ||||| | || | || |||||||| ||| ||
Sbjct 86906 AGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCA 86965
Query 62866 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 62925
|||||| || || ||||| || ||||||| ||| |||||| || | || || |
Sbjct 86966 GTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATA 87025
Query 62926 CCAGACGACTC-GAGCCTTTATTAT-AGATTTGTATCTCTTTTCTCTTTCGTATAGTGTA 62983
||| | | || | ||||| || | ||| | || | || || |||| |||
Sbjct 87026 CCACA-GCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTT-CGTACTTGGTA 87083
Query 62984 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACAC 63043
|| | || || || || || | | |||| ||||| || || | || |||
Sbjct 87084 TAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCAC 87143
Query 63044 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63103
|| | | ||| | |||| | || || || ||||| || | |||||||||||| |
Sbjct 87144 ATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAG 87203
Query 63104 GCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63163
|| | || | ||| | | | | ||||| || || ||||| ||||| |||
Sbjct 87204 GCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGG 87263
Query 63164 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63223
||| | | | ||||| |||||||| |||| ||| ||||| | | | || || || |||
Sbjct 87264 AACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTG 87323
Query 63224 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63283
|| || |||||||| | ||| | ||| || || || | || | |||||| |||| ||||
Sbjct 87324 TTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATA 87383
Query 63284 CCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATA----TTACT 63339
|| || || ||||| ||||| || | || || ||| | ||||| ||| |||
Sbjct 87384 CCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTAC- 87442
Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399
||| ||||| || || || ||||| || ||||| | ||||| || | || ||
Sbjct 87443 -GTTG--AGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTC 87499
Query 63400 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63459
|||||| || || ||||| || ||| |||||| | | || || ||| | ||| |
Sbjct 87500 ATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGG 87559
Query 63460 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAG 63519
| ||| || || || || | ||||||||| || ||||| || | || || |
Sbjct 87560 CTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACAT 87619
Query 63520 TAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGC 63573
|| ||||| || || | | | || | || |||| || || || ||
Sbjct 87620 GAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCA------GATACCGACAGC 87673
Query 63574 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63633
|||||||| | |||||||||||| | ||||| |||||| || | || | | ||
Sbjct 87674 TACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATA 87733
Query 63634 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693
|||| ||||||| || || |||||||| || | ||| ||||| || || || | |||
Sbjct 87734 GGATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAAT 87793
Query 63694 AACCGAGTTGAGTTTATCCTTAT 63716
|||||| || | |||||||
Sbjct 87794 GGCCGAGTCCAGCTCTTCCTTAT 87816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633629109054000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |