Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq38 150 2e-31
>seq38
Length=199572
Score = 150 bits (166), Expect = 2e-31
Identities = 485/746 (65%), Gaps = 9/746 (1%)
Strand=Plus/Minus
Query 92966 TTCATTCCTAGAAGACGTACAGGTA-GAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024
||||| || |||||| | |||| | |||| || || | ||| || |||||||| |||||
Sbjct 76846 TTCATACCAAGAAGA-GCGCAGGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAAC 76788
Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTG 93082
||| || | | || || | || ||| ||| | || |||| | | | | |
Sbjct 76787 GGCATCAGTGATAATGTCCTGGA-TCAACTGCTTGCTAGGGCGGTTGTTCAAG-TGAGAG 76730
Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142
| | | ||| ||||||||||| || | ||| || || || || |||| ||| || |
Sbjct 76729 AAAAGAAGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAG 76670
Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202
|| || ||||| || | || || || || |||||||| || || ||||| ||||
Sbjct 76669 AAGGTCAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCA 76610
Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA 93262
|| || || ||||| || ||||| ||||| || || | ||| | |||||| | |
Sbjct 76609 GAGAAGAAGATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCC 76550
Query 93263 TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322
|| | | ||||| || | ||||| ||||| || || ||||| | || ||
Sbjct 76549 TTGTCGGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCA 76490
Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382
|| ||||| || ||||| |||| | | || ||||| |||||||| | ||
Sbjct 76489 ATGGCGTTGAACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGG 76430
Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442
|| ||| | || || || | |||||||| ||| ||||| ||||| || || | ||
Sbjct 76429 GAGTACGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCC 76370
Query 93443 TCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502
|| | |||||||| || ||| || | ||| || | || || ||||| ||||| ||
Sbjct 76369 TCGGGAATCTGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCA 76310
Query 93503 GATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GC 93559
|| || || || || || | | || || || | ||||| | | | |
Sbjct 76309 GAGGCAGCGAAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGG 76250
Query 93560 TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619
|| | ||| ||| ||||| || || | || | || ||| ||||||| || || ||
Sbjct 76249 TTGTTCCAGTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCC 76190
Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679
|| || || |||||||| | ||| || || || || | || || || | || || ||
Sbjct 76189 TCGGCCTTCTTGTACATTTGCCAGATCTCATGGTACTTGATGGGGAAGAGCACGAAGCGG 76130
Query 93680 TTAGGGTTATCTTTTAGTAACGGCTC 93705
|| ||||| |||| || | |||||
Sbjct 76129 TTGGGGTTCTCTTGCAGGAGGGGCTC 76104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858259322600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |