Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq38 150 2e-31 >seq38 Length=199572 Score = 150 bits (166), Expect = 2e-31 Identities = 485/746 (65%), Gaps = 9/746 (1%) Strand=Plus/Minus Query 92966 TTCATTCCTAGAAGACGTACAGGTA-GAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 ||||| || |||||| | |||| | |||| || || | ||| || |||||||| ||||| Sbjct 76846 TTCATACCAAGAAGA-GCGCAGGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAAC 76788 Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTG 93082 ||| || | | || || | || ||| ||| | || |||| | | | | | Sbjct 76787 GGCATCAGTGATAATGTCCTGGA-TCAACTGCTTGCTAGGGCGGTTGTTCAAG-TGAGAG 76730 Query 93083 TACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTG 93142 | | | ||| ||||||||||| || | ||| || || || || |||| ||| || | Sbjct 76729 AAAAGAAGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAG 76670 Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 || || ||||| || | || || || || |||||||| || || ||||| |||| Sbjct 76669 AAGGTCAAACCGGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCA 76610 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA 93262 || || || ||||| || ||||| ||||| || || | ||| | |||||| | | Sbjct 76609 GAGAAGAAGATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCC 76550 Query 93263 TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322 || | | ||||| || | ||||| ||||| || || ||||| | || || Sbjct 76549 TTGTCGGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCA 76490 Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 || ||||| || ||||| |||| | | || ||||| |||||||| | || Sbjct 76489 ATGGCGTTGAACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGG 76430 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCT 93442 || ||| | || || || | |||||||| ||| ||||| ||||| || || | || Sbjct 76429 GAGTACGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCC 76370 Query 93443 TCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCG 93502 || | |||||||| || ||| || | ||| || | || || ||||| ||||| || Sbjct 76369 TCGGGAATCTGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCA 76310 Query 93503 GATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GC 93559 || || || || || || | | || || || | ||||| | | | | Sbjct 76309 GAGGCAGCGAAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGG 76250 Query 93560 TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619 || | ||| ||| ||||| || || | || | || ||| ||||||| || || || Sbjct 76249 TTGTTCCAGTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCC 76190 Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679 || || || |||||||| | ||| || || || || | || || || | || || || Sbjct 76189 TCGGCCTTCTTGTACATTTGCCAGATCTCATGGTACTTGATGGGGAAGAGCACGAAGCGG 76130 Query 93680 TTAGGGTTATCTTTTAGTAACGGCTC 93705 || ||||| |||| || | ||||| Sbjct 76129 TTGGGGTTCTCTTGCAGGAGGGGCTC 76104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858259322600