Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq38 383 3e-101 seq59 199 7e-46 >seq38 Length=199572 Score = 383 bits (424), Expect = 3e-101 Identities = 618/879 (70%), Gaps = 36/879 (4%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || |||||| |||||||||||||| || ||| |||||| ||| Sbjct 76149 ATCAAGTACCATGAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCC 76208 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCAC---TGTCTGAGAACGAA 42401 |||||||||||| || ||||||| || |||| | | || | || | ||| Sbjct 76209 GAGGAGATTGACTTGTCCAAGGATCTTCACGACTGGAACAACCGCATGACCAAGGATGAA 76268 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 |||| ||| || || | || ||||||||||| ||||||||||| || ||||| ||| Sbjct 76269 CAGTTCTTCATCTCTCACGTCCTTGCCTTCTTCGCTGCCTCTGACGGTATTGTCAACGAG 76328 Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGC 42521 ||| ||| | | ||| ||||||||| ||||| |||||||| ||||| Sbjct 76329 AACTTGGTCGAGCGTTTCTCTGCCGAGGTGCAGATTCCCGAGGCCCGCTGCTTTTACGGT 76388 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 |||||||| || |||||| | ||||| ||| |||| || ||| || | || ||| Sbjct 76389 TTCCAGATTATGATGGAGAACATTCACTCGGAGACGTACTCCCTCCTGATCGATACCTAC 76448 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| ||| || | |||| | |||||||| ||||| || || || || |||||| Sbjct 76449 ATCAAGGAGCCTGCTCAGCGCACGTACCTGTTCAACGCCATTGATACCATTCCTTGCATC 76508 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGAT---CGAGAGTCCCGACGCAACGTTCGGC 42698 ||||| |||||||| || || ||||| ||| | || | || || | | Sbjct 76509 CGCCGCAAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAG---GAGTCGACCTTTGCC 76565 Query 42699 GAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCC 42758 || | ||||| |||||| | ||||| ||||| ||||||||||| || ||||| ||||| Sbjct 76566 CAGCGTCTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCT 76625 Query 42759 ATCTTCTGGCT---CAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 ||||| ||||| ||||| ||| | ||||||||| | |||||||| ||||| || Sbjct 76626 ATCTTTTGGCTGCGCAAGCGT--GGTAT-GATGCCCGGTTTGACCTTCTCAAACGAGCTG 76682 Query 42816 ATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 ||| | | || ||||| || || | |||||||||||||| || ||||| ||| | Sbjct 76683 ATCTCCCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTTCTTTTCTCT---CACTTG 76739 Query 42876 AGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATC 42932 | |||| ||||| | ||| || | ||| || ||| ||||| || ||||| | ||| Sbjct 76740 A---ACAACCGCCCTAGCAAGCAGTTGATCCAGGACATTATCACTGATGCCGTTGTTATC 76796 Query 42933 GAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTC 42992 |||||||||||||| || || | || ||| | || | || |||||| |||||| Sbjct 76797 GAGAAGGAGTTCCTTACTGAGGCTCTTCCCTGCGCTCTTCTTGGTATGAACGCTGACCTC 76856 Query 42993 ATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--C 43050 ||| | |||||| ||| ||||||||||| ||| ||| ||| |||| || | Sbjct 76857 ATGAAGACTTACATCGAGTTCGTCGCCGACCGTCTTCTGG------TGGCTCTCGGCAAC 76910 Query 43051 GCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 | | | ||||| | | |||||||||||||||||| |||||||| | | ||| Sbjct 76911 GACAAGGTGTACAAGGCTTCTAACCCCTTCGACTTTATGGAAAACATCTCCCTCGGTGGC 76970 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| ||||||||||| |||| ||||||||| Sbjct 76971 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 77009 >seq59 Length=151500 Score = 199 bits (220), Expect = 7e-46 Identities = 949/1496 (63%), Gaps = 49/1496 (3%) Strand=Plus/Plus Query 243940 CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGAT 243999 |||||| ||||| | |||||||||| | | ||||| || | || | | ||| Sbjct 86129 CTGAGAAATCTCCCAAACCGTCTTGTACAGAGACTTGATGTCAGCAGGAATGCTGGGGAT 86188 Query 244000 GTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCC 244059 |||||| | || || |||| | |||| || | |||||| ||| |||||| || Sbjct 86189 GTTCTGGATAGAACCGTTGTCGGAAATGATACGGTTCTTCATGTTGTCGGACCACAGACC 86248 Query 244060 CAAGCGCTCCAGCGCCTCGAC-CAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCA 244118 | | |||| | | ||| || | ||| || ||||| ||||| || | || || Sbjct 86249 AAGGTCAACCAG-GTCACGAAGCAACCACGGGTTGACAACCTGGAACTCACCAGCCAACA 86307 Query 244119 CGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCT 244178 | ||||||||||| | |||| || ||||||| || ||| |||| ||||| |||| Sbjct 86308 CACGGCGCTGGTAAATGTTGGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCT 86367 Query 244179 GCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCT 244238 | | ||| || || ||||| || | || || || ||| | || |||||| || Sbjct 86368 GGGACGTCGAGGCTGTGGGCATAGGGGCCAAAAGAAGGGAGTTGCGAACACCGTGCTGCT 86427 Query 244239 GGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGC 244298 ||| || | | |||||||||||||| |||| | | | | Sbjct 86428 TGATCTGGTCCTTCAAAGAGTTCCAGTCCCACA---------GGTCACTGGGGGTAACAT 86478 Query 244299 CCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGG 244358 |||||||||| ||||| || | |||| ||| || ||||||||||||| ||||| Sbjct 86479 CCCACATGTCGAACTGAAGGATACCCTGAGAGACAGGAGAACCCTCGTAGGTCGAGTAGG 86538 Query 244359 GACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418 |||| || | || | | || | | |||||||| |||| ||| |||||||| | Sbjct 86539 GACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGGCAGCGTGGTAAATGGTCTCAA 86598 Query 244419 AGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG--GTGAAGGGGATGCCCATCATCAT 244476 ||||| |||||| | | ||||||| | |||| || || |||| | || Sbjct 86599 AGATCTGCTTGTTGAGCTGACGGGCCT--CAGCAGACTCAAAAGGCATGCGAAGGGCCAG 86656 Query 244477 GAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCG 244536 |||| | || ||||| ||||| || || | |||||||| | ||| ||| ||||| | Sbjct 86657 GAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTT 86716 Query 244537 CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGAT 244596 ||| ||| |||||||| ||| | || || | ||| | |||||| | Sbjct 86717 ACGGGCCTCGATAACGGGGTAGTGGTTCACATCAATAATGCGGTTCAAGTTGCGAACAAC 86776 Query 244597 CATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGT 244656 | | ||| ||| |||| ||| |||||||| ||| | | || | Sbjct 86777 GACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTA-------GGA-----GTTGTTGTT 86824 Query 244657 GATCCTC-ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCG 244715 | | || ||||| | || || | ||||||||||| ||||| ||||| || | Sbjct 86825 G-TAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGG 86883 Query 244716 AGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT---ACTGCACTTGATGGTGCCCAGGT 244772 | ||||| || ||||| ||||| ||||| ||||| || || ||||||| Sbjct 86884 GAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGC---GAATAGTTCCCAGGT 86940 Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832 || || || |||| ||||||| |||||||| |||||||| || || |||| Sbjct 86941 TCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGGGTTACCAGTCT 87000 Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892 | ||| || | | || | ||| || | | ||||| | ||| || ||| Sbjct 87001 CAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTGGGCCTTAATGGTCAGACG-GCCA 87059 Query 244893 TG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCT 244951 | ||||| ||||| ||| || || ||||| || || ||| || || | Sbjct 87060 CGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCC 87119 Query 244952 AGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGC 245011 ||||| |||||| |||||||||||| |||| | |||| | || || | || | Sbjct 87120 AGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTC 87179 Query 245012 ATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAG 245071 ||||| | || || ||||| | ||| |||| | || | | | ||| ||| Sbjct 87180 ATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTA 87239 Query 245072 CCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAG 245131 || |||||||| || || | || || || || || ||||||| ||||||| ||| Sbjct 87240 CCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAA 87299 Query 245132 ACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GC 245187 | || | || ||||| |||||||| || ||||| || | | | ||||| Sbjct 87300 ATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGATCGA----CGTAACGAGCAGTATT 87355 Query 245188 GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247 |||||||| |||| | || || || ||||| ||| ||||||||||| ||||| Sbjct 87356 GTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTA 87415 Query 245248 GGCGCCCTTGCCCCTG--AGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAG 245305 | || | | | | | | || | || | || | || || || ||||||| Sbjct 87416 AGAACCAGTAGCACGGATACGGTGTACGTTGAGA--CCAATGCCACCCGCCATCTTGGAG 87473 Query 245306 ATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTG 245365 || | ||||| |||||| |||||| || || || || |||||| |||||||| Sbjct 87474 ATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCTTCATGTCT 87533 Query 245366 AGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGG 245421 | || ||||| || || |||||||||| ||| | | | |||||| || || || Sbjct 87534 ACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGG 87589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334891452400