Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq38 123 5e-23 >seq38 Length=199572 Score = 123 bits (136), Expect = 5e-23 Identities = 171/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 || ||||| || || |||| | ||| ||||| ||| || || ||| |||| ||| Sbjct 76773 ATTATCACTGATGCCGTTGTTATCGAGAAGGAGTTCCTTACTGAGGCTCTTCCCTGCGCT 76832 Query 243562 CTTATTGGCATGAACTCTGAACTCATGG-GACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||| |||||| |||| |||||| ||| |||||||| ||||| |||||||| | Sbjct 76833 CTTCTTGGTATGAACGCTGACCTCATGAAGACT-TACATCGAGTTCGTCGCCGACCGTCT 76891 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | | || || || | || || |||||||| | |||||||| | ||||||||| Sbjct 76892 TCTGGTGGCTCTCGGCAACGACAAGGTGTACAAGGCTTCTAACCCCTTCGACTTTATGGA 76951 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||| || || || || || ||||||||||| ||||||||| |||| || || Sbjct 76952 AAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 77008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874842312750