Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq59 140 4e-28
seq38 105 8e-18
seq17 98.7 1e-15
>seq59
Length=151500
Score = 140 bits (154), Expect = 4e-28
Identities = 655/1028 (64%), Gaps = 18/1028 (2%)
Strand=Plus/Plus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962
|||||||| |||||||| || | || | | | || || |||| ||||| |||
Sbjct 86280 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGC 86339
Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022
|| |||||||| |||||||||| || |||| || |||||||||||||| || ||||
Sbjct 86340 TCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAA 86399
Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGT 114080
|||||| ||| || | ||| | | | | || | ||||| | | || ||||| |
Sbjct 86400 AGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTTCCAGTCCCAC 86459
Query 114081 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140
|| | | || | | | | |||||| || ||||| |||||||| || ||| | || |
Sbjct 86460 AGGTCA-CTGGGGGT-AACATCCCACATGTCGAACTGAAGGATACCCTGAGAGACAGGAG 86517
Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 114200
| ||||| | ||| ||| || || |||| || | ||| | |||||||||||
Sbjct 86518 AACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGG 86577
Query 114201 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCA 114259
| ||||| || || |||||||| || | || | || | |||||| | || |||
Sbjct 86578 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGAC-GGGCCTCAGCAGACTCA 86636
Query 114260 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 114319
|| | | || | || |||| || ||||| || ||||| | || || |||
Sbjct 86637 AAAGGCATGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGG 86696
Query 114320 CGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATA 114376
|| || | ||| || || || || ||| ||||| || ||| ||| |||
Sbjct 86697 CGGTGGCGCATGTTGCTGTTACG---GGCCTCGATAACGGGGTAGTGGTTCACATCAATA 86753
Query 114377 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 114436
| | || | || || ||||| |||| || || ||||| | | | || |
Sbjct 86754 ATGCGGTTCAAGTTGCGAACAACGACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAG 86813
Query 114437 CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 114496
| | | | | ||| | |||||| || | || ||||| || ||||| |
Sbjct 86814 GAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCACACGGCA 86873
Query 114497 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTG 114556
|||||| | | |||||| || || || || || | || ||||| ||| ||
Sbjct 86874 ACCTCATCGGGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGAATAGTT 86933
Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616
|||| |||||| || || ||| ||| || ||||||||| |||||| | || |
Sbjct 86934 CCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGGGTTA 86993
Query 114617 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGT--G 114673
|| ||||| || || | || | ||||| | ||| | | || | ||| | || |
Sbjct 86994 CCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTG-GGCCTTAATGGTCAG 87052
Query 114674 GCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG 114733
|| | | || ||||||| |||||||| || ||||| || ||||| || || || |
Sbjct 87053 ACG--GCCACGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCATAG 87110
Query 114734 GCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCA 114793
|| | || || || || | ||||| | ||||| ||| | || || ||||
Sbjct 87111 CAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCA 87170
Query 114794 ACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT 114853
|||||||||||||| | || || ||||| | || ||| | ||| ||| |||
Sbjct 87171 ACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAATC 87230
Query 114854 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 114913
|| || | || || || || | || | || || | | ||| |||||||||||
Sbjct 87231 TCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACGGC 87290
Query 114914 TCCAGGTA 114921
||||||||
Sbjct 87291 TCCAGGTA 87298
>seq38
Length=199572
Score = 105 bits (116), Expect = 8e-18
Identities = 341/523 (65%), Gaps = 11/523 (2%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| |||||||| ||||||||||| || || || |||||| || ||
Sbjct 76718 GGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACC 76659
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||| | ||| ||||| || ||| || || | ||| | ||| |||||||||||
Sbjct 76658 GGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGAT 76599
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTC 126222
||||| || || || |||| ||||||| ||||||| ||||| |||| |
Sbjct 76598 ACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGG---TCGACTCCTTGTCGGT 76542
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282
|| |||||||| ||||| | ||||| ||| || || | ||| | || || |
Sbjct 76541 AATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTT 76482
Query 126283 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342
|| || | | | | | || || |||||||| |||| || || || || ||
Sbjct 76481 GAACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGT 76422
Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401
|| ||| | | | ||| || ||| | |||| || |||| || ||| |
Sbjct 76421 CTCCGAGTGAATGTTCTCCATCAT-AATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAA 76363
Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461
|||| ||||| | | ||| | | ||||| ||||| || || || |||
Sbjct 76362 TCTGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAG 76303
Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 126518
| || || || |||| | ||||| |||||||| || | ||| || | ||||
Sbjct 76302 CGAAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTTCC 76243
Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||| ||||||||| || | || | |||||| ||||||||
Sbjct 76242 AGTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCA 76200
>seq17
Length=280677
Score = 98.7 bits (108), Expect = 1e-15
Identities = 202/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Plus
Query 172618 GAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATA 172677
||||||||| || || |||||||||| |||| ||| | ||| ||||| || |||||||
Sbjct 146577 GAGACCCTTGATATGCGAACCATCGTGATCCTGATCGGCCATGATCATCAGATGACCATA 146636
Query 172678 GCGAAGCTC---GGAAACATCTTG-ATACT-CCTTACCCTGTTGAAGACCCAAGATCTTC 172732
|||||| | || | | | || | ||| |||| || | ||||||||||| ||
Sbjct 146637 ACGAAGCCCCTTGGTATC--CGTGTAAACTGCCTTG---TGCTTAAGACCCAAGAACTGT 146691
Query 172733 TTGAGATCATTGAA-CTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATT 172791
|||| || ||||| || ||||| || | || ||| |||||||| || || ||
Sbjct 146692 TTGATAT-TTTGAATTTCCTGGTTCTTGGTAATCTGGTCCAAAGAAGCATCACGAACGTT 146750
Query 172792 TTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACC 172851
||| |||||||| ||||| ||||| | | ||| || | | | | | ||||
Sbjct 146751 GAGCATCTTACCACGGAGTGGGAAAACACCAATGCGGTCAGGATCCAAAATGGCACGACC 146810
Query 172852 AGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 172904
|||||| || | | ||| || || ||||| || |||| || || |||||||
Sbjct 146811 AGCAACGGCCAAAGACTTGGCCGAGTCACCTTCGGTCAGAATCAGAGTACACT 146863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597350874574200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |