Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq38 111 2e-19
seq24 98.7 1e-15
>seq38
Length=199572
Score = 111 bits (122), Expect = 2e-19
Identities = 329/502 (66%), Gaps = 19/502 (4%)
Strand=Plus/Plus
Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGGCCGAGCGC 52400
||||| | ||||| |||||||||| | ||||| | | || | ||| ||||
Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATT---ACCGACAAGGAGTCGACCTTTGCCCAGCGT 76571
Query 52401 ATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTT 52460
|||| ||||| || || ||||| | || || || || ||||||| | ||||||
Sbjct 76572 CTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTT 76631
Query 52461 TACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGC 52520
| | | | || || |||||||| |||| ||| |||||| |||| || ||
Sbjct 76632 TGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGT 76691
Query 52521 GACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAA 52580
|| || || || ||||| |||||||| ||||| | | | | | ||| | ||
Sbjct 76692 GATGAGGGTCTTCACACCGACTTTGCCTGCCTTCTTTTCT---CTCACTTGAAC----AA 76744
Query 52581 TTGGATTCGGACAC----GATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGA 52636
| | | | | ||||| | ||| ||| || || || | |||||| |||||
Sbjct 76745 CCGCCCTAGCAAGCAGTTGATCCAGGACATTATCACTGATGCCGTTGTTATCGAGAAGGA 76804
Query 52637 GTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGA 52696
||| |||| | || || || || || || || |||||||| | ||||
Sbjct 76805 GTTCCTTACTGAGGCTCTTCCCTGCGCTCTTCTTGGTATGAACGCTGACCTCATGAAGAC 76864
Query 52697 GTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCA 52755
||||||||||| || || || ||||| ||||| ||| |||| | | ||| | ||
Sbjct 76865 TTACATCGAGTTCGTCGCCGACCGTCTTCTGGTGGCTCTC-GGCAACGACAAGGTGTACA 76923
Query 52756 ACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTT 52815
| ||| || || || || |||||| | ||||| || || | |||||||||||||| |
Sbjct 76924 AGGCTTCTAACCCCTTCGACTTTATGGAAAACATCTCCCTCGGTGGCAAGACCAACTTCT 76983
Query 52816 TCGAGAAGCGAGTCGGCGAGTA 52837
|||||||||| ||||| || ||
Sbjct 76984 TCGAGAAGCGTGTCGGTGACTA 77005
>seq24
Length=264051
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | || || ||||| || || || || |
Sbjct 250079 GACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCG 250020
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || |||||||| ||||||||||| ||||| || ||||| ||| || || |
Sbjct 250019 AAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTCACG 249960
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | ||||| ||||| | || | || || |||||||| || ||
Sbjct 249959 TTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTG 249900
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 249899 ACAAAGATCTGCAT 249886
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || ||||| |||||| || || ||||| | |
Sbjct 250535 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCA 250476
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||| || || ||||| || ||||| ||| || || |
Sbjct 250475 AAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTCACG 250416
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | ||||| || || | || | || || ||||| ||||| ||
Sbjct 250415 TTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTCTTTCCAGTGAGAGTCTTC 250356
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 250355 ACGAAGATCTGCAT 250342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260135802800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |