Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq59 141 1e-28
seq38 109 7e-19
>seq59
Length=151500
Score = 141 bits (156), Expect = 1e-28
Identities = 837/1326 (63%), Gaps = 35/1326 (3%)
Strand=Plus/Plus
Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923
|||||||| |||||||| || | || | | | || ||||||| ||||| |||
Sbjct 86280 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGC 86339
Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983
|| |||||||| |||||||||| || |||| || |||||||||||||| || ||||
Sbjct 86340 TCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAA 86399
Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGT 116041
|||||| |||||| | ||| | | | || | ||||| | | || ||||| |
Sbjct 86400 AGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTTCCAGTCCCAC 86459
Query 116042 AGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 116101
|| | | || | | | |||||||| || ||||| |||||||| || || | || |
Sbjct 86460 AGGTCA-CTGGGGGT-AACATCCCACATGTCGAACTGAAGGATACCCTGAGAGACAGGAG 86517
Query 116102 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 116161
| ||||| | ||| || || || |||| || | ||| | |||||||||||
Sbjct 86518 AACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGG 86577
Query 116162 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCA 116220
| ||||| || || |||||||| || | || | || | |||||| | || |||
Sbjct 86578 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGAC-GGGCCTCAGCAGACTCA 86636
Query 116221 AA---CGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277
|| | | || || | | || |||| || ||||| || ||||| | || ||
Sbjct 86637 AAAGGCATGCGAAGGGCC---AGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATG 86693
Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCG 116334
||||| || | ||| || || || || ||| ||||| || ||| |||
Sbjct 86694 GGGCGGTGGCGCATGTTGCTGTTACG---GGCCTCGATAACGGGGTAGTGGTTCACATCA 86750
Query 116335 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 116394
|||| | || | || || ||||| |||| || || ||||| | | | ||
Sbjct 86751 ATAATGCGGTTCAAGTTGCGAACAACGACCTTGGTGACATCGTGCAGCTTCTGGAAGTCG 86810
Query 116395 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
| | | | | | ||| | |||||| || | || ||||| || |||||
Sbjct 86811 TAGGAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCACACG 86870
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| |||||| | | |||||| || || || || || | || ||||| |||
Sbjct 86871 GCAACCTCATCGGGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGAATA 86930
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
|| |||| |||||| || || ||| ||| || ||||||||| ||||| | ||
Sbjct 86931 GTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGGG 86990
Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633
| || ||||| || || | || | ||||| | ||| | | || | ||| | ||
Sbjct 86991 TTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTG-GGCCTTAATGGT 87049
Query 116634 --GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691
| || | | || ||||||| |||||||| || ||||| |||||||| || || ||
Sbjct 87050 CAGACG--GCCACGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATC-GCC 87106
Query 116692 ACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTC 116750
| ||| || | || || || || | || || | ||||| ||| | || ||
Sbjct 87107 ATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTT 87166
Query 116751 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 116810
|||||| ||||||||||| | || || ||||| | || ||| | ||| ||| ||
Sbjct 87167 CTCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACG 87226
Query 116811 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 116870
| || || | || || || || | || | || || | | ||| ||||||||
Sbjct 87227 AATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCA 87286
Query 116871 CGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATA 116924
||| |||||||| | || | | || | |||| |||| |||| | || ||
Sbjct 87287 CGGCTCCAGGTAAATGGCAAAAGCACC---GGGACGCTTGTTACCACCCTGATCGACGTA 87343
Query 116925 CCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 116984
| || || ||| || || || | ||| |||| ||||| | || || || ||
Sbjct 87344 ACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGT 87403
Query 116985 CCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGC 117044
|| ||| ||| | || | || | ||| | || | |||||| || || ||
Sbjct 87404 GCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGC 87463
Query 117045 CCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACC 117104
| ||| ||||| ||||| | |||| || | ||||| || ||||| ||| |
Sbjct 87464 CATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTC 87523
Query 117105 CTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 117164
||| | | | | |||||| || | || ||| || |||||||||||||||||
Sbjct 87524 CTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAG 87583
Query 117165 GGTTGG 117170
||| ||
Sbjct 87584 GGTAGG 87589
>seq38
Length=199572
Score = 109 bits (120), Expect = 7e-19
Identities = 522/818 (64%), Gaps = 25/818 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||| || |||||
Sbjct 77006 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTTTCCAT 76947
Query 127291 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG 127345
||| || || ||||| | ||| | || |||| | || | | ||
Sbjct 76946 AAAGTCGAAGGGGTTAGAAGCCTTG---TACACCTTGTCGTTGCCGAGAGCCACCAGA-- 76892
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTC---TCAGAGTTCATACCGATG 127402
||||| || | |||| |||| ||||| || | || | |||| ||||||||| |
Sbjct 76891 AGACGGTCGGCGACGAACTCGATGTA---AGTCTTCATGAGGTCAGCGTTCATACCAAGA 76835
Query 127403 AGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACG 127462
|| || || || || || | |||| ||||||| || | || || || |
Sbjct 76834 AGAGCGCAGGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCATCAGTGATA 76775
Query 127463 ATGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGC 127521
||| | || || | | | ||| | ||| | |||| ||| || ||
Sbjct 76774 ATGTCCTGGATCAACTGCTTGCTAGGGCGGTTGT-TCAAGTGAGAGAAAAGAAGGCAGGC 76716
Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581
||| || ||| |||||||| ||||||||||| || || || |||||| || ||| ||
Sbjct 76715 AAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACCGGG 76656
Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641
||| | ||| ||||| || ||| || || | ||| | |||||||||||||| ||
Sbjct 76655 CATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGATACC 76596
Query 127642 CTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACC 127700
||| || || || |||| ||||||| |||||||| || | |||| || ||
Sbjct 76595 CTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGG-TCGACTCCTTGTCGGTAATCC 76537
Query 127701 ACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA 127760
|||||| ||||| | ||||| ||| || || | ||| | || || | || |
Sbjct 76536 ACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTGAACA 76477
Query 127761 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 127820
| | | | | | || || |||||||| |||| || || || || || ||
Sbjct 76476 GGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTCTCCG 76417
Query 127821 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 127879
||| | | | ||| || ||| | |||| || |||| || ||| |||||
Sbjct 76416 AGTGAATGTTCTCCATCAT-AATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATCTGC 76358
Query 127880 ACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 127939
||||| | | ||| | | ||||| ||||| || || || |||| ||
Sbjct 76357 ACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAG 76298
Query 127940 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 127996
|| || |||| | ||||| |||||||| || | ||| || | |||||||||
Sbjct 76297 AAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTTCCAGTCG 76238
Query 127997 TCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
| |||||||| || | || | |||||| ||||||||
Sbjct 76237 TGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCA 76200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504400873400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |