Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq59 145 1e-29 >seq59 Length=151500 Score = 145 bits (160), Expect = 1e-29 Identities = 419/634 (66%), Gaps = 8/634 (1%) Strand=Plus/Plus Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943 ||| |||||||| || ||||| || || || ||| ||| | ||||||| | | Sbjct 85976 CAGGTAGTACATACCCGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGAT 86035 Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003 || | || | | ||||| |||||||||||||| ||||| || || || ||||| Sbjct 86036 CTTACCCATGGTAGGGTCCTTCATGTGAATGTTCAACGACTGAGACTGATCAAT-AAAGG 86094 Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGA 204062 | || ||||| || ||||| | | || || ||| ||||||||||| ||||||||| Sbjct 86095 CACCACGATCGGCCGCCATTTGAACAACAGTGCGCTGAGAAATCTCCCAAACCGTCTTGT 86154 Query 204063 ACAC-GTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGC 204120 ||| | || || ||| ||| | || | || ||| || || |||||||||| Sbjct 86155 ACAGAGACT-TGATGTCAGCAGGAATG-CTGGGGATGTTCTGGATAGAACCGTTGTCGGA 86212 Query 204121 CATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCA 204179 || | | || || | | || ||||| | |||| | | | || || || | || Sbjct 86213 AATGATACGGTTCTTCATGTTGTCGGACCACA-GACCAAGGTCAACCAGGTCACGAAGCA 86271 Query 204180 GGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGG 204239 ||||||| | ||| || || || | || ||| | || | | | |||| | Sbjct 86272 ACCACGGGTTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAG 86331 Query 204240 TGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGG 204299 || | || ||||| ||||||||| || | |||||| | || ||| |||||||| | Sbjct 86332 TGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAG 86391 Query 204300 GAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCC 204359 | |||| || ||||||||||| ||||||| | | || | | ||||| |||| ||| Sbjct 86392 GGGCCAAAAGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTTCC 86451 Query 204360 AGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419 |||| || ||||||| | || |||||||||||||||||| ||| || ||| || Sbjct 86452 AGTCCCACAGGTCACTGGGGGTAACATCCCACATGTCGAACTGAAGGATACCCTGAGAGA 86511 Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGG 204479 | || |||| ||| |||| || || || || | | |||||| || Sbjct 86512 CAGGAGAACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCT 86571 Query 204480 CCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | | ||| | ||| ||||||||||||||||| Sbjct 86572 CGAGGGCAGCGTGGTAAATGGTCTCAAAGATCTG 86605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151572104400