Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq104 190 3e-43 seq102 168 8e-37 seq16 154 2e-32 seq59 109 7e-19 >seq104 Length=74017 Score = 190 bits (210), Expect = 3e-43 Identities = 490/739 (66%), Gaps = 17/739 (2%) Strand=Plus/Plus Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085 |||| ||||| | || ||||| ||||| |||||||||||||| |||| || | || | Sbjct 50474 CGGCCTGGACAGCGGCACCGTAGGCGACAGCCTCATCGGGGTTGATCGACTTCTCAAGCT 50533 Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145 || ||||| || | || || | | | || || || ||||| || || || |||| Sbjct 50534 TCTTGCCGTTGAAGAACTCGGAAAGGAGCTTCTGGATCTTGGGGATACGGGTAGAACCAC 50593 Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTT 7205 |||||| ||||| || | || | || || | || ||||| || Sbjct 50594 CGACCAGGACGATCTCGTCAACCTGGGACTTGTTGAGGCCAGAGTCCTTGAGGACAGAGG 50653 Query 7206 CGACAGGTTCCATACATTTACGGAACAAGTCCATACA---CAGTTCCTCAAAACGTGCAC 7262 |||| || |||| | | ||| | || | | ||| ||||| ||||| |||| Sbjct 50654 CGACGGGCTCCAGAGTGCCAGCGAA---GGCCTTGGAGTTCAGCTCCTCGAAACGGGCAC 50710 Query 7263 GGGTAAT--GGATG-TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 |||| || ||| | | ||| ||| || ||| | | | ||||| || ||||| | Sbjct 50711 GGGTGATCTGGACGGTGTAGTCCTCA---CCATCGAAAAGGGTGTCAATCTCGATGGTGG 50767 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 | || || ||||| | || ||||| || ||||| || || || || | |||||| | Sbjct 50768 TCTGGGCACCGGAAGAAAGGGTACGCTTGGCACGCTCGCAAGCAGTCCGGAGACGACGGA 50827 Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439 | ||||| | | |||||||| ||| ||||| || || | || || | | ||| Sbjct 50828 GAGCACGGGCATCACCGGAAAGATCCTTCTTGGTCTTGCGGGTGAAGTCCTTCTTGCAGT 50887 Query 7440 G-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 | |||| | || | | |||||||| | |||||||| ||| || || || ||||| || Sbjct 50888 GGTCGA-GCAGGTTAGTGTCGAAATCCTGACCACCCAGGTGAGTGTCACCAGCGGTAGCC 50946 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| |||| ||| || | ||||| | || || ||||| || |||||||||||| Sbjct 50947 TTGACGGTGAAGACACCACCCTGGATGTTCAGCAGGGAGACATCGAAAGTACCACCACCC 51006 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTACGCG 7615 || || | || || ||||| || | ||| ||| | | |||||||| ||| Sbjct 51007 AGATCGTAGATCAGGACGTTGCGCTCCTTGTCGGACTTGCCGGCACCCAGACCGTAAGCG 51066 Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC 7675 ||||| || || || || || || || ||||| || ||| ||||||||||| | | Sbjct 51067 ATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGTTAAGGCCAGCAATGGCACCG 51126 Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735 || || || || || || || || ||||| |||||||| ||||| || | ||| || Sbjct 51127 GCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCGGGGACGGTAATGACAGCC 51186 Query 7736 TCCGTGACTTTCTTACCGA 7754 | | ||| ||||| |||| Sbjct 51187 TTCTCGACCTTCTTGCCGA 51205 >seq102 Length=75333 Score = 168 bits (186), Expect = 8e-37 Identities = 276/398 (69%), Gaps = 0/398 (0%) Strand=Plus/Minus Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 ||||||||||| | ||| || || || || || | ||||| || |||||||| | ||| Sbjct 25526 TCTTCACCACCAAGGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCATCCTCA 25467 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | | |||||||| || ||||||||||| || || || || || ||||| Sbjct 25466 ATGGTAAGGAGGGAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTGCGC 25407 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || ||||| || |||||||| ||||| || || || || || || || || Sbjct 25406 TCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCAGCAGTGGGCTCGTTGATG 25347 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 ||||| ||| ||| || || ||||| | ||||| || || || || || || || Sbjct 25346 ATACGGAGAACGTTAAGACCGGCAATCAAACCAGCATCCTTGGTAGCCTGACGCTGAGAG 25287 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 ||||| |||||||| ||||| || ||||| || | |||| | ||||||| || || Sbjct 25286 TCGTTGAAGTAGGCGGGGACAGTGACGACGGCCTGGTTGACGGTGGTACCGAGGTAGGAC 25227 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | || ||| ||| | || ||||| || || ||||| || | | || Sbjct 25226 TCAGCAGTCTCACGCATCTTGATCAGGACCATGGAGGAGATCTCCTCGGGGGTGAAGGTC 25167 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 || || ||||| || || ||||| || || | ||| || Sbjct 25166 TTGGTCTCACCCTTGAACTCAACCTCGATGACGGGCTT 25129 >seq16 Length=281560 Score = 154 bits (170), Expect = 2e-32 Identities = 403/612 (66%), Gaps = 12/612 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || || || || || || |||| ||| Sbjct 265160 TCGAAATCCTCACCACCAAGGTGAGTGTCACCAGCAGTAGCAAGAACCTCGAAGACACCA 265101 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT 7573 |||||| | | || ||||| || ||||||||||| || || | ||||| Sbjct 265100 GACTCAATGGACAGAAGAGAGACATCGAAAGTACCACCACCAAGATCGTAGACAATGATC 265041 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | | || |||| |||| || |||||||| |||||||| || || || || Sbjct 265040 TGGCGCTCACCGGCGTC---AGTCTTGTCAAGACCGTAGGCGATAGCGGCAGCAGTGGGC 264984 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || |||| ||| |||||| ||| || || ||||| || | ||||| || || || || Sbjct 264983 TCGTTAACAATGCGAAGAATGTTAAGACCCGCAATGGTACCGGCATCCTTGGTAGCCTGA 264924 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | |||||| |||||||| || || || ||||| |||| ||||| |||| || Sbjct 264923 CGCTGAGCATCGTTGAAGTAGGCGGGAACGGTGACGACGGCGTGGGTGACGGTCTTGCCA 264864 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || || || |||| || ||||| ||| || | ||| | |||| ||| || | Sbjct 264863 AGGTAAGACTCGGCGACCTCCTTCATCTTGCCCAGGATCATAGCGGAAACCTCCTCGGGA 264804 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 | || || | ||| || | ||||| | | | || || || | | Sbjct 264803 GAGAAGGTCTTGGCAGAACCCTTGTAGTCAACCTTGACAAAAGGCTT---GCCATCCTTG 264747 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 || ||||| || | | | || |||||| | |||| || | || | ||||| Sbjct 264746 TTGACGACCTTGTAGGGGAAGTGCTTGATATCGGCCTGGAGCTCCTTCTCGGTGAACTTG 264687 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | || || |||||||| |||| ||||| ||||| |||||||| || | |||||| Sbjct 264686 CGACCAATGAGACGCTTGACATCGAAAACGGTGTTGATGGGGTTCGCGGGAGCCTGGTTC 264627 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||| || | ||| || || | || || || | |||||||| ||||| Sbjct 264626 TTGGCAGCGTCACCAACAAGGCGCTC---CTCCTCAGTGAAACCAACGTACGAAGGGGTG 264570 Query 8054 GTTCGATTCCCT 8065 | || || ||| Sbjct 264569 ATACGGTTACCT 264558 >seq59 Length=151500 Score = 109 bits (120), Expect = 7e-19 Identities = 390/604 (65%), Gaps = 17/604 (3%) Strand=Plus/Plus Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618 ||||| || |||||||||||||| |||||||||| ||| || | || ||| | Sbjct 87168 TCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGA 87227 Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678 ||| || | ||| || ||| || | || || || |||| | ||| |||||||| Sbjct 87228 ATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCAC 87287 Query 105679 GGTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATAT 105732 || || | || | |||| || || ||||| || | |||| ||| || Sbjct 87288 GGCTCCAGGTAAATGGCAAAAGCACC---GGGACGCTTGTTACCACCCTGATCGACGTAA 87344 Query 105733 CTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTT 105792 | || || ||| | || || ||||| |||| |||||| | || || || || || Sbjct 87345 CGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTG 87404 Query 105793 CCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCC 105852 ||| ||| | || | | ||||| | | ||| |||| | ||||| || || ||| Sbjct 87405 CCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGCC 87464 Query 105853 CACTTACTGAT--ACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTT 105910 ||| ||| ||||| | || || | || || || ||||| |||||||| || | Sbjct 87465 ATCTTGGAGATCATAGCGCA-AGTC-TTGAGGGTGTCATAGATACCTTCGATACTGTCCT 87522 Query 105911 CCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACA 105970 |||| | | | || ||| || || || | || || ||| |||||||| ||||| | Sbjct 87523 CCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGA 87582 Query 105971 GAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTATGTTTCCAGGAC 106028 | || || | ||||||| |||| || ||| |||| | | ||| |||||||| || Sbjct 87583 GGGTAGGAGATGCATGAGTGAAGAA--CTTGCTCGACATGAGGTTGTAAGTTTCCAGAAC 87640 Query 106029 GTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGGGTGT 106088 | |||| || || || ||||| | ||| || |||||| | | || || Sbjct 87641 ACGCTCAACATTGTCACCCCAGATACCGACAGCTACACGCATAATCATGTGCTGAGGACG 87700 Query 106089 TTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAACCAAA 106148 |||| ||| | ||||||| || | ||||| | |||| | || || |||||||| Sbjct 87701 CTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGATCTTTCCAAGGTCTTGAAACCAAA 87760 Query 106149 ATAC 106152 ||| Sbjct 87761 GTAC 87764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129902206600