Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq104 190 3e-43
seq102 168 8e-37
seq16 154 2e-32
seq59 109 7e-19
>seq104
Length=74017
Score = 190 bits (210), Expect = 3e-43
Identities = 490/739 (66%), Gaps = 17/739 (2%)
Strand=Plus/Plus
Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085
|||| ||||| | || ||||| ||||| |||||||||||||| |||| || | || |
Sbjct 50474 CGGCCTGGACAGCGGCACCGTAGGCGACAGCCTCATCGGGGTTGATCGACTTCTCAAGCT 50533
Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145
|| ||||| || | || || | | | || || || ||||| || || || ||||
Sbjct 50534 TCTTGCCGTTGAAGAACTCGGAAAGGAGCTTCTGGATCTTGGGGATACGGGTAGAACCAC 50593
Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTT 7205
|||||| ||||| || | || | || || | || ||||| ||
Sbjct 50594 CGACCAGGACGATCTCGTCAACCTGGGACTTGTTGAGGCCAGAGTCCTTGAGGACAGAGG 50653
Query 7206 CGACAGGTTCCATACATTTACGGAACAAGTCCATACA---CAGTTCCTCAAAACGTGCAC 7262
|||| || |||| | | ||| | || | | ||| ||||| ||||| ||||
Sbjct 50654 CGACGGGCTCCAGAGTGCCAGCGAA---GGCCTTGGAGTTCAGCTCCTCGAAACGGGCAC 50710
Query 7263 GGGTAAT--GGATG-TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319
|||| || ||| | | ||| ||| || ||| | | | ||||| || ||||| |
Sbjct 50711 GGGTGATCTGGACGGTGTAGTCCTCA---CCATCGAAAAGGGTGTCAATCTCGATGGTGG 50767
Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379
| || || ||||| | || ||||| || ||||| || || || || | |||||| |
Sbjct 50768 TCTGGGCACCGGAAGAAAGGGTACGCTTGGCACGCTCGCAAGCAGTCCGGAGACGACGGA 50827
Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439
| ||||| | | |||||||| ||| ||||| || || | || || | | |||
Sbjct 50828 GAGCACGGGCATCACCGGAAAGATCCTTCTTGGTCTTGCGGGTGAAGTCCTTCTTGCAGT 50887
Query 7440 G-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498
| |||| | || | | |||||||| | |||||||| ||| || || || ||||| ||
Sbjct 50888 GGTCGA-GCAGGTTAGTGTCGAAATCCTGACCACCCAGGTGAGTGTCACCAGCGGTAGCC 50946
Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558
||||| |||| ||| || | ||||| | || || ||||| || ||||||||||||
Sbjct 50947 TTGACGGTGAAGACACCACCCTGGATGTTCAGCAGGGAGACATCGAAAGTACCACCACCC 51006
Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTACGCG 7615
|| || | || || ||||| || | ||| ||| | | |||||||| |||
Sbjct 51007 AGATCGTAGATCAGGACGTTGCGCTCCTTGTCGGACTTGCCGGCACCCAGACCGTAAGCG 51066
Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC 7675
||||| || || || || || || || ||||| || ||| ||||||||||| | |
Sbjct 51067 ATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGTTAAGGCCAGCAATGGCACCG 51126
Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735
|| || || || || || || || ||||| |||||||| ||||| || | ||| ||
Sbjct 51127 GCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCGGGGACGGTAATGACAGCC 51186
Query 7736 TCCGTGACTTTCTTACCGA 7754
| | ||| ||||| ||||
Sbjct 51187 TTCTCGACCTTCTTGCCGA 51205
>seq102
Length=75333
Score = 168 bits (186), Expect = 8e-37
Identities = 276/398 (69%), Gaps = 0/398 (0%)
Strand=Plus/Minus
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
||||||||||| | ||| || || || || || | ||||| || |||||||| | |||
Sbjct 25526 TCTTCACCACCAAGGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCATCCTCA 25467
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | | | |||||||| || ||||||||||| || || || || || |||||
Sbjct 25466 ATGGTAAGGAGGGAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTGCGC 25407
Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642
|| | || ||||| || |||||||| ||||| || || || || || || || ||
Sbjct 25406 TCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCAGCAGTGGGCTCGTTGATG 25347
Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702
||||| ||| ||| || || ||||| | ||||| || || || || || || ||
Sbjct 25346 ATACGGAGAACGTTAAGACCGGCAATCAAACCAGCATCCTTGGTAGCCTGACGCTGAGAG 25287
Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762
||||| |||||||| ||||| || ||||| || | |||| | ||||||| || ||
Sbjct 25286 TCGTTGAAGTAGGCGGGGACAGTGACGACGGCCTGGTTGACGGTGGTACCGAGGTAGGAC 25227
Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822
|| || | || ||| ||| | || ||||| || || ||||| || | | ||
Sbjct 25226 TCAGCAGTCTCACGCATCTTGATCAGGACCATGGAGGAGATCTCCTCGGGGGTGAAGGTC 25167
Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
|| || ||||| || || ||||| || || | ||| ||
Sbjct 25166 TTGGTCTCACCCTTGAACTCAACCTCGATGACGGGCTT 25129
>seq16
Length=281560
Score = 154 bits (170), Expect = 2e-32
Identities = 403/612 (66%), Gaps = 12/612 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | ||| || || || || || || || || |||| |||
Sbjct 265160 TCGAAATCCTCACCACCAAGGTGAGTGTCACCAGCAGTAGCAAGAACCTCGAAGACACCA 265101
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT 7573
|||||| | | || ||||| || ||||||||||| || || | |||||
Sbjct 265100 GACTCAATGGACAGAAGAGAGACATCGAAAGTACCACCACCAAGATCGTAGACAATGATC 265041
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | | || |||| |||| || |||||||| |||||||| || || || ||
Sbjct 265040 TGGCGCTCACCGGCGTC---AGTCTTGTCAAGACCGTAGGCGATAGCGGCAGCAGTGGGC 264984
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| |||| ||| |||||| ||| || || ||||| || | ||||| || || || ||
Sbjct 264983 TCGTTAACAATGCGAAGAATGTTAAGACCCGCAATGGTACCGGCATCCTTGGTAGCCTGA 264924
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | |||||| |||||||| || || || ||||| |||| ||||| |||| ||
Sbjct 264923 CGCTGAGCATCGTTGAAGTAGGCGGGAACGGTGACGACGGCGTGGGTGACGGTCTTGCCA 264864
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813
|| || || || |||| || ||||| ||| || | ||| | |||| ||| || |
Sbjct 264863 AGGTAAGACTCGGCGACCTCCTTCATCTTGCCCAGGATCATAGCGGAAACCTCCTCGGGA 264804
Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873
| || || | ||| || | ||||| | | | || || || | |
Sbjct 264803 GAGAAGGTCTTGGCAGAACCCTTGTAGTCAACCTTGACAAAAGGCTT---GCCATCCTTG 264747
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
|| ||||| || | | | || |||||| | |||| || | || | |||||
Sbjct 264746 TTGACGACCTTGTAGGGGAAGTGCTTGATATCGGCCTGGAGCTCCTTCTCGGTGAACTTG 264687
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| || || |||||||| |||| ||||| ||||| |||||||| || | ||||||
Sbjct 264686 CGACCAATGAGACGCTTGACATCGAAAACGGTGTTGATGGGGTTCGCGGGAGCCTGGTTC 264627
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || ||||| || | ||| || || | || || || | |||||||| |||||
Sbjct 264626 TTGGCAGCGTCACCAACAAGGCGCTC---CTCCTCAGTGAAACCAACGTACGAAGGGGTG 264570
Query 8054 GTTCGATTCCCT 8065
| || || |||
Sbjct 264569 ATACGGTTACCT 264558
>seq59
Length=151500
Score = 109 bits (120), Expect = 7e-19
Identities = 390/604 (65%), Gaps = 17/604 (3%)
Strand=Plus/Plus
Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618
||||| || |||||||||||||| |||||||||| ||| || | || ||| |
Sbjct 87168 TCAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGA 87227
Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678
||| || | ||| || ||| || | || || || |||| | ||| ||||||||
Sbjct 87228 ATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCAC 87287
Query 105679 GGTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATAT 105732
|| || | || | |||| || || ||||| || | |||| ||| ||
Sbjct 87288 GGCTCCAGGTAAATGGCAAAAGCACC---GGGACGCTTGTTACCACCCTGATCGACGTAA 87344
Query 105733 CTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTT 105792
| || || ||| | || || ||||| |||| |||||| | || || || || ||
Sbjct 87345 CGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTG 87404
Query 105793 CCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCC 105852
||| ||| | || | | ||||| | | ||| |||| | ||||| || || |||
Sbjct 87405 CCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGCC 87464
Query 105853 CACTTACTGAT--ACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTT 105910
||| ||| ||||| | || || | || || || ||||| |||||||| || |
Sbjct 87465 ATCTTGGAGATCATAGCGCA-AGTC-TTGAGGGTGTCATAGATACCTTCGATACTGTCCT 87522
Query 105911 CCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACA 105970
|||| | | | || ||| || || || | || || ||| |||||||| ||||| |
Sbjct 87523 CCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGA 87582
Query 105971 GAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTATGTTTCCAGGAC 106028
| || || | ||||||| |||| || ||| |||| | | ||| |||||||| ||
Sbjct 87583 GGGTAGGAGATGCATGAGTGAAGAA--CTTGCTCGACATGAGGTTGTAAGTTTCCAGAAC 87640
Query 106029 GTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGGGTGT 106088
| |||| || || || ||||| | ||| || |||||| | | || ||
Sbjct 87641 ACGCTCAACATTGTCACCCCAGATACCGACAGCTACACGCATAATCATGTGCTGAGGACG 87700
Query 106089 TTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAACCAAA 106148
|||| ||| | ||||||| || | ||||| | |||| | || || ||||||||
Sbjct 87701 CTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGATCTTTCCAAGGTCTTGAAACCAAA 87760
Query 106149 ATAC 106152
|||
Sbjct 87761 GTAC 87764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129902206600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |