Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq59 215 6e-51 seq38 111 2e-19 >seq59 Length=151500 Score = 215 bits (238), Expect = 6e-51 Identities = 899/1397 (64%), Gaps = 39/1397 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || || |||||||| || || || |||| |||| Sbjct 87697 CCTCAGCACATGATTATGCGTGTAGCTGTCGGTATCTGGGGTGACAATGTTGAGCGTGTT 87638 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 |||| || ||| || ||||| | | |||| || ||| | || ||||||||| Sbjct 87637 CTGGAAACTTACAACCTCATGTCGAGCAAGTTCTTCACTCATGCATCTCCTACCCTCTTC 87578 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||||||||| || ||||| | || ||| ||| | | | | |||||||| Sbjct 87577 AACGCTGGTACTCCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGACATGAAGGAGGAC 87518 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGGGCTG 111849 ||| | || || || | ||| |||| || | ||| | | ||||| ||| ||| | Sbjct 87517 AGTATCGAAGGTATCTATGACACCCTCAA-GACT-TGCGCTATGATCTCCAAGATGGCGG 87460 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909 |||| || || | || | || | || | || | ||| ||| || || | Sbjct 87459 GTGGCATTGGTCTCAACGTACACCGTATCCGTGCTACTGGTTCTTACATTGCTGGCACCA 87400 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | ||| || | |||||| |||| ||| | || || || ||| || || || || | Sbjct 87399 ACGGTACCTCGAACGGTATTGTTCCCATGTTGCGTGTCTTCAACAATACTGCTCGTTACG 87340 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | | || | ||| ||||| | || || | || | || || ||||| |||| Sbjct 87339 TCGATCAGGGTGGTAACAAGCGTCCC---GGTGCTTTTGCCATTTACCTGGAGCCGTGGC 87283 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| | | ||||||||||| | || ||||| ||| | |||||| | || Sbjct 87282 ACGCTGATGTGTTCGAGTTCCTTGATCTCCGGAAGAACCACGGTAAGGAGGAGATTC-GT 87224 Query 112084 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 || |||||| | ||| || | |||||||| ||| | ||||||||| | |||||| || Sbjct 87223 GCTCGCGATTTGTTCCTTGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTTGAGAAG 87164 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGG 112201 | ||||| ||| ||||| | || || || || || || || | || ||| | || Sbjct 87163 AACGGCAACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTAT-GG 87105 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACG---AGGAAGAAAGTCGGGCGACTGCGAC 112258 || || ||||| || ||||| || ||||||| |||| | | || || || || ||| Sbjct 87104 CGATGAATTTGAGGCTCTCTATACCAAGTACGAACAGGAGGGACGT-GGCCGTCT--GAC 87048 Query 112259 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | || | || | ||||| | ||||| | || |||| || |||||||||| | Sbjct 87047 CAT-TAAGGCCCAGAAGCTGTGGTATGCTATCTTGGAGGCTCAGACTGAGACTGGTAACC 86989 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | ||||| ||||| || ||| |||| |||||||| || ||||| |||| | Sbjct 86988 CTTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACCTGGGAACTA 86929 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 | ||||||||||| || || || ||| | || | | |||||| || | Sbjct 86928 TTCGCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGCGCTCCCGATGAGGTTGCCG 86869 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTT 112496 |||| ||||| || || | ||||| || | ||| || | || | | || | | Sbjct 86868 TGTGCAACCTGGCTTCTCTTGCTCTTCCTGCCTTTGTTGACTACA-ACAACAACTCCTAC 86810 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 || | | || || ||||| || || || || ||| | ||| | ||||| Sbjct 86809 GACTTCCAGAAGCTGCACGATGTCACCAAGGTCGTTGTTCGCAACTTGAACCGCATTATT 86750 Query 112557 GATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 ||| || ||||||||| ||| || ||||| || ||| | ||||| || Sbjct 86749 GATGTGAACCACTACCCCGTTATCGAG---GCCCGTAACAGCAACATGCGCCACCGCCCC 86693 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGAT 112673 || ||| | ||||| || ||||| || |||| ||| | |||| | ||||| Sbjct 86692 ATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCTGGCCCTTCGCATGCCTTTTGAG 86633 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || | || || | |||| || || |||||||| || || ||||| || || Sbjct 86632 TCTGCTGAGGCCCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTACCACGCTGCCCTC 86573 Query 112734 GAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793 |||||| | || | || |||| ||||| || |||| ||||||||||| Sbjct 86572 GAGGCGTCGTGCGATATTGCTATTCTTGAAGGTCCCTACTCGACCTACGAGGGTTCTCCT 86513 Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC---TAC 112850 | || || || | ||||| || || ||||||| | || | || || | || | Sbjct 86512 GTCTCTCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTTACCCCCAG--TGACCTGTGG 86456 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 |||||| || || | ||||| | |||||| || | ||| |||| ||| ||| | || Sbjct 86455 GACTGGAACTCTTTGAAGGACCAGATCAAGCAGCACGGTGTTCGCAACTCCCTTCTTTTG 86396 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| |||||||| || | || || ||||||| || || ||||| || || Sbjct 86395 GCCCCTATGCCCACAGCCTCGACGTCCCAGATTCTGGGTAACAACGAGTGCTTCGAGCCT 86336 Query 112971 TACACGACGAACATCTA 112987 ||||| | ||||| || Sbjct 86335 TACACTTCCAACATTTA 86319 >seq38 Length=199572 Score = 111 bits (122), Expect = 2e-19 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 102129 AAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGA 102185 || || || ||||| |||||||| || |||| ||||| ||||||| |||| Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAGTCGA---CCTTTGCCCAGCGT 76571 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 || | || ||||| |||||||||||||||||||||||| |||| | |||| | | Sbjct 76572 CTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTT 76631 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||||| ||||| ||| | ||||| ||| | |||||| |||||||| ||||| ||| Sbjct 76632 TGGCTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGT 76691 Query 102306 GACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||| || ||| || ||||| Sbjct 76692 GATGAGGGTCTTCACACCGACTTTGC 76717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739567862800