Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq38 141 1e-28 >seq38 Length=199572 Score = 141 bits (156), Expect = 1e-28 Identities = 562/870 (65%), Gaps = 21/870 (2%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 |||||||| || | ||| |||||||| || ||||| ||| |||| ||||||||||||||| Sbjct 77005 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTTTCCATA 76946 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || | || | | | || |||| || | ||||||||| Sbjct 76945 AAGTCGAAGGGGTTAGAAGCCTTGTACACCTTGTCGTTG-CCGAGAGCCACCAGAAGACG 76887 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 |||| ||| ||||||| || ||| || | |||||||| | ||| || Sbjct 76886 GTCGGCGACGAACTCGATGTAAGTCTTCATGAGGTCAGCGTTCATACCAAGAAGAGCGCA 76827 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 || ||||| || | ||| | ||||||||| | || || || | | ||| || Sbjct 76826 GGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCATCAGTGATAATGTCCTG 76767 Query 119447 AAT-AGTTTCTGTCGATGGTTTGTTTCTCAAG--AGTTTAAACAACTCTACGGCAAATTC 119503 || | | || | | || ||| ||||| || ||| || | |||||| || Sbjct 76766 GATCAACTGCTTGCTAGGGCG-GTTGTTCAAGTGAGAGAAAAGAAGGCA--GGCAAAGTC 76710 Query 119504 TTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGCATG 119561 ||||| || ||||| || ||||| ||||| || |||| |||| || ||||| Sbjct 76709 GGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAA--CCGGGCATC 76652 Query 119562 AGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCC 119621 | || | || ||||||||||| | ||| ||||| |||||||| ||||| Sbjct 76651 ATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGATACCCTCA 76592 Query 119622 ACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTCG---AACCACTT 119677 || || || || | ||||||| || ||||||||| ||||||| | |||||| Sbjct 76591 ACGGCAGCAAAGGCAACCAGACGCTGGGC-AAAGGTCGACTCCTTGTCGGTAATCCACTT 76533 Query 119678 GAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTG 119737 || ||||||| |||||| || ||||| || | || | ||||| | ||| || | Sbjct 76532 CAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTGAACAGGTA 76473 Query 119738 CTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATG 119797 | | | |||| ||||| || || |||| || || ||||| ||||| || Sbjct 76472 CGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTCTCCGAGTG 76413 Query 119798 AACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTC 119857 || | || | ||| | | ||||| |||| || |||| ||| ||||| || Sbjct 76412 AATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATCTGCACCTC 76353 Query 119858 GTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGC 119917 | ||| ||| | | | || || ||||| || || || |||||||||| || Sbjct 76352 GGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAGAAGGC 76293 Query 119918 TAAGATGTACTTTATGAATTTCTGTTCATTATCG---TTGAGTGTTTTCCAGTCGTCCAT 119974 | || || ||||| |||||||| | | || | | |||||||||| | Sbjct 76292 AAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTTCCAGTCGTGAAG 76233 Query 119975 ATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAG 120034 ||| || |||||||| | ||| || || |||||| ||| || ||||| || || | Sbjct 76232 ATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 76173 Query 120035 TTCCCAAAGTTCAGGATACTTCA-GGGGAA 120063 || ||| | ||| | ||||| | |||||| Sbjct 76172 TTGCCAGATCTCATGGTACTTGATGGGGAA 76143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973312797000