Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq38 141 1e-28
>seq38
Length=199572
Score = 141 bits (156), Expect = 1e-28
Identities = 562/870 (65%), Gaps = 21/870 (2%)
Strand=Plus/Minus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|||||||| || | ||| |||||||| || ||||| ||| |||| |||||||||||||||
Sbjct 77005 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTTTCCATA 76946
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
||||| || || || | || | | | || |||| || | |||||||||
Sbjct 76945 AAGTCGAAGGGGTTAGAAGCCTTGTACACCTTGTCGTTG-CCGAGAGCCACCAGAAGACG 76887
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
|||| ||| ||||||| || ||| || | |||||||| | ||| ||
Sbjct 76886 GTCGGCGACGAACTCGATGTAAGTCTTCATGAGGTCAGCGTTCATACCAAGAAGAGCGCA 76827
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446
|| ||||| || | ||| | ||||||||| | || || || | | ||| ||
Sbjct 76826 GGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCATCAGTGATAATGTCCTG 76767
Query 119447 AAT-AGTTTCTGTCGATGGTTTGTTTCTCAAG--AGTTTAAACAACTCTACGGCAAATTC 119503
|| | | || | | || ||| ||||| || ||| || | |||||| ||
Sbjct 76766 GATCAACTGCTTGCTAGGGCG-GTTGTTCAAGTGAGAGAAAAGAAGGCA--GGCAAAGTC 76710
Query 119504 TTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGCATG 119561
||||| || ||||| || ||||| ||||| || |||| |||| || |||||
Sbjct 76709 GGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAA--CCGGGCATC 76652
Query 119562 AGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCC 119621
| || | || ||||||||||| | ||| ||||| |||||||| |||||
Sbjct 76651 ATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGATACCCTCA 76592
Query 119622 ACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTCG---AACCACTT 119677
|| || || || | ||||||| || ||||||||| ||||||| | ||||||
Sbjct 76591 ACGGCAGCAAAGGCAACCAGACGCTGGGC-AAAGGTCGACTCCTTGTCGGTAATCCACTT 76533
Query 119678 GAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTG 119737
|| ||||||| |||||| || ||||| || | || | ||||| | ||| || |
Sbjct 76532 CAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTGAACAGGTA 76473
Query 119738 CTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATG 119797
| | | |||| ||||| || || |||| || || ||||| ||||| ||
Sbjct 76472 CGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTCTCCGAGTG 76413
Query 119798 AACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTC 119857
|| | || | ||| | | ||||| |||| || |||| ||| ||||| ||
Sbjct 76412 AATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATCTGCACCTC 76353
Query 119858 GTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGC 119917
| ||| ||| | | | || || ||||| || || || |||||||||| ||
Sbjct 76352 GGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAGAAGGC 76293
Query 119918 TAAGATGTACTTTATGAATTTCTGTTCATTATCG---TTGAGTGTTTTCCAGTCGTCCAT 119974
| || || ||||| |||||||| | | || | | |||||||||| |
Sbjct 76292 AAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTTCCAGTCGTGAAG 76233
Query 119975 ATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAG 120034
||| || |||||||| | ||| || || |||||| ||| || ||||| || || |
Sbjct 76232 ATCCTTGGACAAGTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 76173
Query 120035 TTCCCAAAGTTCAGGATACTTCA-GGGGAA 120063
|| ||| | ||| | ||||| | ||||||
Sbjct 76172 TTGCCAGATCTCATGGTACTTGATGGGGAA 76143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588973312797000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |