Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq59 226 3e-54
seq38 96.9 4e-15
>seq59
Length=151500
Score = 226 bits (250), Expect = 3e-54
Identities = 943/1468 (64%), Gaps = 49/1468 (3%)
Strand=Plus/Plus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|| ||||| | ||||| || || ||||| || || ||||||| || || | || |||
Sbjct 86319 TAAATGTTGGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAG 86378
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
||||| ||||| || |||| | ||| ||| |||| ||| | | |||||| | |||
Sbjct 86379 GCTGTGGGCATAGGGGCCAAAAGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCC 86438
Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112
|| | | | |||||| | | | | || || | || | ||||||| || || ||||
Sbjct 86439 TTCAAAGAGTTCCAGTCCCACAGGTCA-CTGGGGGTAACAT-CCCACATGTCGAACTGAA 86496
Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172
| | || || || ||||||||||| | ||| |||| ||||| ||| |
Sbjct 86497 GGATACCCTGAGAGACAGGAGAACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAA 86556
Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232
|| || |||||| |||| ||||| || ||||| |||||||| | || | ||
Sbjct 86557 TATCGCACGACGCCTCGAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCT 86616
Query 106233 CCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287
||| ||| | || ||||| |||| || | || || |||| || ||
Sbjct 86617 GACGGGCCTCAGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGG-----CATCAGCCAG 86671
Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC--- 106344
||| |||||||| | ||| || || | ||| ||||| || || || || |||
Sbjct 86672 ACCCTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTACGGGC---CTCGAT 86728
Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404
|||||| || || ||||| | ||||| | || ||| | ||| ||||
Sbjct 86729 AACGGGGTAGTGGTTCACATCAATAATGCGGTTCAAGTTGCGAACAACGACCTTGGTGAC 86788
Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464
|| || || || | | || | | | | | | | ||| | ||||| ||
Sbjct 86789 ATCGTGCAGCTTCTGGAAGTCGTAGGAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGAGC 86848
Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524
| || |||| ||||| || || |||||| | | |||||| | || || ||
Sbjct 86849 AAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTACTCGATGATCTCAGT 86908
Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584
|| | ||||||||| ||| || |||| ||||| ||||||||||| ||||||
Sbjct 86909 GCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTG 86968
Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
||||||||| |||||| | || | || ||||| ||||| | || | || || | |||
Sbjct 86969 ATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCA 87028
Query 106645 CA-CATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGT 106700
|| | || | | || ||||| | |||| ||||||||| |||||||| || |
Sbjct 87029 CAGCTTCTGGGCCT----TAATGGTCAGACGGCCACGTCCCTCCTGTTCGTACTTGGTAT 87084
Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759
|||| || ||||| || || ||| || ||| | || || || || || || ||
Sbjct 87085 AGAGAGCCTCAAATTCATC-GCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCAC 87143
Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819
| |||| ||| | || || |||||| ||||||||||| | || |||||||||| |
Sbjct 87144 ATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAG 87203
Query 106820 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879
| || | ||| | | ||| ||| || | ||| ||||| || | ||||||
Sbjct 87204 GCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGG 87263
Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 106939
||||| | | ||| |||||||| ||||| || || | || | || || |||||
Sbjct 87264 AACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACC---GGGACGC 87320
Query 106940 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993
||| | |||| || || || || || ||| || || || | ||| |||| |
Sbjct 87321 TTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACA 87380
Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 107053
||||| | || ||| || || || ||| ||| | | || | | | ||
Sbjct 87381 ATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGT 87440
Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTC 107111
| || | ||||| || || ||| ||| ||||| | ||||| | | | | || ||
Sbjct 87441 ACGTTGAGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCA-AGT-CTTGAGGGTGT 87498
Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171
|||||||||| | ||| ||||||||| || | | | ||||||| || | ||| |
Sbjct 87499 CATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGG 87558
Query 107172 GTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGA 107229
| || |||||||| ||||||||||| || | ||| ||| ||| | | |||| ||
Sbjct 87559 GCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGA--AGAACTTGCTCGA 87616
Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289
||| || ||| || |||| ||| |||| | || || ||| |||| || ||
Sbjct 87617 CATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCAGATACCGACAGCTAC 87676
Query 107290 ACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GC 107348
|||||||| ||||| || || || | | |||| || ||| ||||||| |
Sbjct 87677 ACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGA 87736
Query 107349 TCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|||| || | ||| |||| |||||||||
Sbjct 87737 TCTT-TCCAAGGTCTTGAAACCAAAGTA 87763
>seq38
Length=199572
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| ||||||||||| ||||| || || || ||||||||| | ||
Sbjct 76718 GGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACC 76659
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||| | ||| ||||| || |||| | |||| | || | || |||||||||||
Sbjct 76658 GGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGAT 76599
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451
|||||| || ||||| |||| || |||| ||| |||| ||| | |||| | ||
Sbjct 76598 ACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGG-TCGACTCCTTGTCGGTAA 76540
Query 117452 ACCATTTCATTGCCCATTTCGCCTT 117476
||| |||| ||||| | |||||
Sbjct 76539 TCCACTTCAGGGCCCAGTCGGCCTT 76515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978108212600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |