Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq59 226 3e-54 seq38 96.9 4e-15 >seq59 Length=151500 Score = 226 bits (250), Expect = 3e-54 Identities = 943/1468 (64%), Gaps = 49/1468 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||||| || || ||||||| || || | || ||| Sbjct 86319 TAAATGTTGGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAG 86378 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||| ||||| || |||| | ||| ||| |||| ||| | | |||||| | ||| Sbjct 86379 GCTGTGGGCATAGGGGCCAAAAGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCC 86438 Query 106055 TTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || | | | |||||| | | | | || || | || | ||||||| || || |||| Sbjct 86439 TTCAAAGAGTTCCAGTCCCACAGGTCA-CTGGGGGTAACAT-CCCACATGTCGAACTGAA 86496 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | | || || || ||||||||||| | ||| |||| ||||| ||| | Sbjct 86497 GGATACCCTGAGAGACAGGAGAACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAA 86556 Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232 || || |||||| |||| ||||| || ||||| |||||||| | || | || Sbjct 86557 TATCGCACGACGCCTCGAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCT 86616 Query 106233 CCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAG 106287 ||| ||| | || ||||| |||| || | || || |||| || || Sbjct 86617 GACGGGCCTCAGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGG-----CATCAGCCAG 86671 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC--- 106344 ||| |||||||| | ||| || || | ||| ||||| || || || || ||| Sbjct 86672 ACCCTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTACGGGC---CTCGAT 86728 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 |||||| || || ||||| | ||||| | || ||| | ||| |||| Sbjct 86729 AACGGGGTAGTGGTTCACATCAATAATGCGGTTCAAGTTGCGAACAACGACCTTGGTGAC 86788 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464 || || || || | | || | | | | | | | ||| | ||||| || Sbjct 86789 ATCGTGCAGCTTCTGGAAGTCGTAGGAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGAGC 86848 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 | || |||| ||||| || || |||||| | | |||||| | || || || Sbjct 86849 AAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTACTCGATGATCTCAGT 86908 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 || | ||||||||| ||| || |||| ||||| ||||||||||| |||||| Sbjct 86909 GCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTG 86968 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||| |||||| | || | || ||||| ||||| | || | || || | ||| Sbjct 86969 ATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCA 87028 Query 106645 CA-CATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGT 106700 || | || | | || ||||| | |||| ||||||||| |||||||| || | Sbjct 87029 CAGCTTCTGGGCCT----TAATGGTCAGACGGCCACGTCCCTCCTGTTCGTACTTGGTAT 87084 Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 |||| || ||||| || || ||| || ||| | || || || || || || || Sbjct 87085 AGAGAGCCTCAAATTCATC-GCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCAC 87143 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 | |||| ||| | || || |||||| ||||||||||| | || |||||||||| | Sbjct 87144 ATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATCCACAAG 87203 Query 106820 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | || | ||| | | ||| ||| || | ||| ||||| || | |||||| Sbjct 87204 GCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGG 87263 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 106939 ||||| | | ||| |||||||| ||||| || || | || | || || ||||| Sbjct 87264 AACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACC---GGGACGC 87320 Query 106940 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 ||| | |||| || || || || || ||| || || || | ||| |||| | Sbjct 87321 TTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACA 87380 Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 107053 ||||| | || ||| || || || ||| ||| | | || | | | || Sbjct 87381 ATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGT 87440 Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTC 107111 | || | ||||| || || ||| ||| ||||| | ||||| | | | | || || Sbjct 87441 ACGTTGAGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCA-AGT-CTTGAGGGTGT 87498 Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 |||||||||| | ||| ||||||||| || | | | ||||||| || | ||| | Sbjct 87499 CATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGG 87558 Query 107172 GTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGA 107229 | || |||||||| ||||||||||| || | ||| ||| ||| | | |||| || Sbjct 87559 GCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGA--AGAACTTGCTCGA 87616 Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289 ||| || ||| || |||| ||| |||| | || || ||| |||| || || Sbjct 87617 CATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCAGATACCGACAGCTAC 87676 Query 107290 ACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GC 107348 |||||||| ||||| || || || | | |||| || ||| ||||||| | Sbjct 87677 ACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGA 87736 Query 107349 TCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 |||| || | ||| |||| ||||||||| Sbjct 87737 TCTT-TCCAAGGTCTTGAAACCAAAGTA 87763 >seq38 Length=199572 Score = 96.9 bits (106), Expect = 4e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| ||||||||||| ||||| || || || ||||||||| | || Sbjct 76718 GGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACC 76659 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | ||| ||||| || |||| | |||| | || | || ||||||||||| Sbjct 76658 GGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGAT 76599 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 |||||| || ||||| |||| || |||| ||| |||| ||| | |||| | || Sbjct 76598 ACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGG-TCGACTCCTTGTCGGTAA 76540 Query 117452 ACCATTTCATTGCCCATTTCGCCTT 117476 ||| |||| ||||| | ||||| Sbjct 76539 TCCACTTCAGGGCCCAGTCGGCCTT 76515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978108212600