Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq24 138 3e-27
seq14 136 9e-27
>seq24
Length=264051
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||| ||||| || ||||| ||||| |||| || || | ||||| ||
Sbjct 250094 ACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 250035
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || || || || ||||| |||||||| || || ||||| ||
Sbjct 250034 AGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGG 249975
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| ||||||||||| || || || |||||||| | |||||
Sbjct 249974 ATCTTGGACTTCACGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTG 249915
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || || || | |||||
Sbjct 249914 CCAGTCAGGGTCTTGACAAAGATCTGCAT 249886
Score = 136 bits (150), Expect = 9e-27
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| |||||||| || ||||| ||||| |||| || || | ||||| ||
Sbjct 249866 ACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCATCCTCA 249807
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| ||||| || || ||||| || ||||| || || ||||| |||
Sbjct 249806 AGCTGCTTTCCAGCGAAAATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 249747
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| ||||| ||||| || || || || ||||| | |||||
Sbjct 249746 ATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTG 249687
Query 195112 CCTGT 195116
|| ||
Sbjct 249686 CCGGT 249682
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||| ||||||||||| || || || ||||| || | || || | || || ||
Sbjct 250551 AACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTC 250492
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| || |||||||| || || ||||| || || || || || ||||| ||
Sbjct 250491 CAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTG 250432
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||| ||||| |||||||| || ||| || |||||||| || | |||||
Sbjct 250431 GATCTTGCTCTTCACGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTCTT 250372
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | ||| || ||||| | |||||
Sbjct 250371 TCCAGTGAGAGTCTTCACGAAGATCTGCAT 250342
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||||||||||||||| || || || |||||||| | ||||| | ||||| ||
Sbjct 250323 AACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTACGGCCATCCTC 250264
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || ||||| || | || || ||||| || || || || || ||||| ||
Sbjct 250263 AAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 250204
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || |||||| || || ||||| || || || || |||||||||| |||||
Sbjct 250203 GATCTTGGACTTGACATTGTCGATGGTATCTGACGACTCGACCTCAAGGGTAATGGTCTT 250144
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | |||||
Sbjct 250143 GCCAGTCAGGGTCTTGACGAAGATCTGCAT 250114
>seq14
Length=289536
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | ||||| ||
Sbjct 256417 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCA 256358
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| |||||||| || || ||||| ||
Sbjct 256357 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGG 256298
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||||||||| || || || ||||| | |||||
Sbjct 256297 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTA 256238
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
|| |||| || || |||||
Sbjct 256237 CCCGTCAGGGTCTTGACGAA 256218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109476411439955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |