Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq59 150 2e-31
>seq59
Length=151500
Score = 150 bits (166), Expect = 2e-31
Identities = 465/715 (65%), Gaps = 22/715 (3%)
Strand=Plus/Plus
Query 48099 TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCA 48158
|| |||||||| || ||||| | |||||||||||| ||||| | | | | |||
Sbjct 87066 TCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCA 87125
Query 48159 GGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAAT 48218
|| || || || || ||||| | | ||| | | | || | || | |||| ||
Sbjct 87126 GGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAAC 87185
Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278
| ||| || ||||| | || | || ||||| | || | | || || || ||
Sbjct 87186 AAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGG 87245
Query 48279 TTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338
||| | || ||||| || || | | |||||| ||||| || || | || || ||
Sbjct 87246 TTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCA 87305
Query 48339 ATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACT 48398
| |||| || || || ||||| || ||||| | || | ||||||||||| | ||
Sbjct 87306 AAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACA 87365
Query 48399 CTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTA 48458
| ||||| || |||||||| || || |||| ||||| || | ||| ||| ||| ||
Sbjct 87366 CGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTA 87425
Query 48459 GCTCTTATA----TTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC 48514
|| | ||| ||| ||| | ||| || ||||| ||||| || || || | |||
Sbjct 87426 GCACGGATACGGTGTAC--GTTG--AGACCAATGCCACCCGCCATCTTGGAGATCATAGC 87481
Query 48515 ACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574
|| || ||||| ||||| || ||||| ||||| || || |||| | || | ||
Sbjct 87482 GCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAA 87541
Query 48575 ACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAAT 48634
||| ||| | || || || ||| || | || || | || |||||||||||| |
Sbjct 87542 GCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGT 87601
Query 48635 AAACCA-TTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATAT------CCC 48687
|| | || ||| || | | || || ||||| | |||| || | || |||
Sbjct 87602 GAAGAACTTGCTC-GACATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCC 87660
Query 48688 ATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747
| ||||| | || ||||||||| | ||| | ||||| | |||||||| |||
Sbjct 87661 A------GATACCGACAGCTACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGC 87714
Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802
| | || | |||||| ||| ||||||| || || |||||||| || | |||
Sbjct 87715 CGTCAAGCTTGAGAAGATAGGATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTA 87769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562106235378600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |