Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq24 93.3 3e-14
>seq24
Length=264051
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || ||||| || || || || || || |||||||| | || ||| | | |
Sbjct 250329 ACGGAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTACGGCC 250270
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | ||||| || || || ||||||||||| || || || || || || || ||
Sbjct 250269 ATCCTCAAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTT 250210
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || || ||| | || | || || |||| || || ||||| || |
Sbjct 250209 GTCCTGGATCTTGGACTTGACATTGTCGATGGTATCTGACGACTCGACCTCAAGGGTAAT 250150
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| || | || || || || ||||||||
Sbjct 250149 GGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 250114
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | || || || || || || || || ||||| || | | || | | |
Sbjct 250557 ACGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCC 250498
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| |||| |||||||| ||||| || | |||||| || ||||| || || || || ||
Sbjct 250497 GTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTT 250438
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || || || | || | || ||||| | || |||||||||||||
Sbjct 250437 GTCCTGGATCTTGCTCTTCACGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGAT 250378
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || || | ||| || || || ||||||||
Sbjct 250377 GGTCTTTCCAGTGAGAGTCTTCACGAAGATCTGCAT 250342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396276637180305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |