Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq59 259 9e-64 seq38 172 1e-37 >seq59 Length=151500 Score = 259 bits (286), Expect = 9e-64 Identities = 899/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||| | | ||| | | |||||||| ||| |||||||| Sbjct 86277 GGGTTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAA 86336 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||||| ||||||||||| | || |||||||||||| || ||| Sbjct 86337 GGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCC 86396 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC--CGAAGCTCTGCCCAGT 213084 | || || ||| | || ||||||| ||| || | | ||| | ||||| Sbjct 86397 AAAAGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTT--CCAGT 86454 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| |||||| | | || | ||||||||| ||||| | ||| || | Sbjct 86455 CCCA---------CAGGTCACTGGGGGTAACATCCCACATGTCGAACTGAAGGATACCCT 86505 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || || |||| ||| | |||||||| || | | || | ||||| | Sbjct 86506 GAGAGACAGGAGAACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACG 86565 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 |||||| |||||||||| ||| ||||| ||||| |||| | ||||||||| ||||| Sbjct 86566 ACGCCTCGAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGGGCCT 86625 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | | ||| || ||||| | | |||| |||||||||| ||||| || || | Sbjct 86626 CAGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGAACACCAA 86685 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 |||||||| | ||| | || ||| || | ||| | |||||| ||| Sbjct 86686 CACCGATGGGGCGGTGGCGCATGTTGCTGTTACGGGCCTCGATAACGGGGTAGTGGTTCA 86745 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 || || || ||| | |||||| | || |||||||||| | ||| | || | Sbjct 86746 CATCAATAATGCGGTTCAAGTTGCGAACAACGACCTTGGTGACATCGTGCAGCTTCTGGA 86805 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504 | | | || | || | ||||| |||| || || | |||||||||| Sbjct 86806 AGTCGTAGGAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGC 86865 Query 213505 AAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 | ||||| ||||| | | ||| | |||||| |||||||| ||||| |||||| | Sbjct 86866 ACACGGCAACCTCATCGGGAG-CGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTG 86924 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTGGCAGA-ATCCTTGTAGAGCA 213621 || || || |||||||||| ||||| ||| ||||| | |||| ||||||||| |||| Sbjct 86925 CGAATAGTTCCCAGGTTCTTCTGGTT--ACTCTTGCGGTTGCAGTGATCCTTGTACAGCA 86982 Query 213622 TGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCT 213681 || | ||| || ||||| ||| | | ||| || ||| || | | ||||| Sbjct 86983 TGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTGGGCCT 87042 Query 213682 TGACCACCCGCCTGACAGCTCCGGGC-GTAGCCTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 | | | | | | || ||| | || ||||||| ||||| | | ||| Sbjct 87043 TAATGGTCAGACGGCCACGTCCCTCCTGT----TCGTACTTGGTATAGAGAGCCTCAAAT 87098 Query 213741 TCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTC 213799 || | ||| || | | | |||| || || || ||| |||||||| |||||| Sbjct 87099 TCATCGCCATAGCAGTCAG-CCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTT 87157 Query 213800 CCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 |||| | |||| || | || |||||||| || || | ||||| || ||||| | Sbjct 87158 GCCGTTCTTCTCA-ACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAAT 87216 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | | | | |||| ||| || ||| || || ||||| || || || || | | Sbjct 87217 CGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACAT 87276 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGT 213975 | |||||||||||||||| ||| |||||||| || || || | |||| || ||||| | Sbjct 87277 CAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGAT 87336 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035 | || | || ||||||||| |||| | ||| || | ||||| || | Sbjct 87337 CGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTAC 87396 Query 214036 CGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCCCTAT 214093 ||||||| || || || || || || | || | | | || | | |||| || || Sbjct 87397 CGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGA--CCAAT 87454 Query 214094 GCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCAT 214153 |||||| || |||||||||||| ||||| | | | || || ||| || | || Sbjct 87455 GCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGAT 87514 Query 214154 GCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGA 214213 ||||| || | | || | ||||||||| || ||||||||| || | |||| Sbjct 87515 ACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGC 87574 Query 214214 GTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 |||||| || || || ||||| | | |||||| | || | ||| |||| || || Sbjct 87575 GTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTC 87634 Query 214274 CAGGAC 214279 ||| || Sbjct 87635 CAGAAC 87640 >seq38 Length=199572 Score = 172 bits (190), Expect = 1e-37 Identities = 484/735 (66%), Gaps = 15/735 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||| || Sbjct 77009 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTTTC 76950 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| ||| ||||||||| | | || |||||| |||| ||| | |||| | Sbjct 76949 CATAAAGTCGAAGGGGTTAGAAGCCTTGTACACCT-TGTCGTTGCCGAGAGCCACCAGAA 76891 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| |||||||||| | ||||||| |||||| || | || | Sbjct 76890 GACGGTCGGCGACGAACTCGATGTAAGTCTTCATGAGGTCAGCGTTCATACCAAGAAGAG 76831 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | ||||| || || ||||||||||| || ||||| || | ||| | Sbjct 76830 CGCAGGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCATCAGTGATAATGT 76771 Query 48078 GCTT----AAC-GCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 || ||| || | || |||| |||| || ||| | | || | ||| Sbjct 76770 CCTGGATCAACTGCTTG---CT-AGGGCG-GTTGTTCAAGTGAGAGAAA---AGAAGGCA 76719 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| |||| | || || || ||| ||| ||| |||| |||||| | ||| Sbjct 76718 GGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACC 76659 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||| | || | || ||||| || || | || || | |||||||||||||| Sbjct 76658 GGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGAT 76599 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 ||||| || || || || || || | || | || | | | |||||| | || Sbjct 76598 ACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCCTTGTCGGTAAT 76539 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 ||| || |||||||| ||||| |||||| || || || || ||||| ||| Sbjct 76538 CCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTGAA 76479 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 || | | ||| || | | | ||| | |||||| || ||| | |||| |||| Sbjct 76478 CAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTCTC 76419 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 ||||| | ||||| || |||||||| ||||| ||| | |||||| | ||| Sbjct 76418 CGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAAAAGCAGCGGGCCTCGGGAATCTG 76359 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 ||| || | ||||| | ||| | || ||||| ||||| || || || || ||||| || Sbjct 76358 CACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGCAGCGAA 76299 Query 48553 GAAGGCAAGGACATG 48567 |||||||||||| || Sbjct 76298 GAAGGCAAGGACGTG 76284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528549881600