Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq59 221 2e-52 seq38 178 2e-39 >seq59 Length=151500 Score = 221 bits (244), Expect = 2e-52 Identities = 826/1278 (65%), Gaps = 43/1278 (3%) Strand=Plus/Plus Query 221406 CGCAAGACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTC 221464 |||| ||| || || |||||||||||||| ||||||||||||||| ||||||||| Sbjct 86560 CGCACGAC-GCCTCGAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGA 86618 Query 221465 TTGGCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGT 221524 |||||| | ||| || ||||| || || | | ||| | || ||||| ||||| Sbjct 86619 CGGGCCTCAGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGA 86678 Query 221525 ACTCCGATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGAT 221582 || || | ||||||||| | ||| | | ||||| | ||| || || ||||| | Sbjct 86679 ACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTACGG--GCCTCGATAACGGGGT 86736 Query 221583 AAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCA 221642 | ||| || || || | ||| | ||| || | ||| || || ||| || Sbjct 86737 AGTGGTTCACATCAATAATGCGGTTCAAGTTGCGAACAACGACCTTGGTGACATCGTGCA 86796 Query 221643 GCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTA 221702 |||||||| || ||| | || || | | || ||||| || | Sbjct 86797 GCTTCTGG------------AAGTCGTAGGAGTTGTTGTTGTAGTCAACAAAGGCAGGAA 86844 Query 221703 GGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCT 221762 | |||| |||||||| |||||||| ||||| || | |||| ||||||| Sbjct 86845 GAGCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTACTCGATGATCT 86904 Query 221763 CTGTACAGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATT 221820 | || || |||||| | ||| || || ||||||| || || ||| |||||| || Sbjct 86905 CAGTGCAAAGGTTG--GAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTT 86962 Query 221821 GGCAGCG-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCT 221879 | ||| | |||||||| ||||| || || |||||||| ||||||| ||| || Sbjct 86963 G-CAGTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAG 87021 Query 221880 TGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTT-TTCATAC 221938 | ||| || | ||||| || | | | ||| || | || || | ||| ||| Sbjct 87022 CATACCACAGCT-TCTGGGCCTTAATGGTCA---GACGGCCACGTCCCTCCTGTTCGTAC 87077 Query 221939 CCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG 221998 ||||||||| ||||| | || || || || ||||||| || ||| | | Sbjct 87078 TTGGTATAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTG 87137 Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 || ||||| ||| |||||| ||| | | || | || |||||| | || || ||| Sbjct 87138 GGGCACATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAACAAATCAGGAATC 87197 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || | || | ||| | | || ||||||| |||| ||| |||| ||| Sbjct 87198 CACAAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGA 87257 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | ||||| || | |||||||||||||||||||| || | ||| | ||| ||||| Sbjct 87258 TCAAGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGA 87317 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238 |||||||| ||||||||||| || | | | |||||||| || | | || Sbjct 87318 CGCTTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGA 87377 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 || | ||||| || |||||||||||| |||||| | ||| || | || || Sbjct 87378 ACAATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCAC---GGATA 87434 Query 222299 CTGGCAGAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354 | || || | || || ||||| || || |||||||| ||||| ||||||| Sbjct 87435 C-GGTGTACGTTGAGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAG 87493 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 ||||| ||| || || ||| ||||||||| | || | || || ||||| || | Sbjct 87494 GGTGTCATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAG 87553 Query 222415 CTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT 222474 ||| | | || | || ||||| || || || ||| || || || ||| | || Sbjct 87554 CTGGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCT 87613 Query 222475 AGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGG 222533 ||||| || | ||| || || | || | | | ||||| ||| || | | | | Sbjct 87614 CGACATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCAGATACCG-ACAG 87672 Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAG 222591 | | ||| ||||| ||| || | ||| ||| || | |||| |||| || Sbjct 87673 CTACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGA--AG 87730 Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651 || ||| |||||| |||||||| |||||||| | | || ||||| | | | | || Sbjct 87731 ATAGGATCTTTCCAAGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCACGGTCATAGAC 87790 Query 222652 CACGGCGGCGTCCAGCTC 222669 | ||| | ||||||||| Sbjct 87791 AATGGCCGAGTCCAGCTC 87808 >seq38 Length=199572 Score = 178 bits (196), Expect = 2e-39 Identities = 558/860 (65%), Gaps = 24/860 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | |||||||||||||| | ||| |||||| ||||| |||||||| Sbjct 76161 GAGATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGAC 76220 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT-AT--CCAAAGACGAGCAGCATTTTCTC 25590 || ||||||| | ||| |||| || | || |||| || || ||| || || Sbjct 76221 TTGTCCAAGGATCTTCACGACTGGAACAACCGCATGACCAAGGATGAACAGTTCTTCATC 76280 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 |||| | || ||||| || |||||||| ||||| || |||||||| || |||| Sbjct 76281 TCTCACGTCCTTGCCTTCTTCGCTGCCTCTGACGGTATTGTCAACGAGAACTTGGTCGAG 76340 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| | || |||||| |||||| || || |||||||||||||| Sbjct 76341 CGTTTCTCTGCCGAGGTGCAGATTCCCGAGGCCCGCTGCTTTTACGGTTTCCAGATTATG 76400 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || || | ||||| ||| ||| || || ||||| || ||||| | || Sbjct 76401 ATGGAGAACATTCACTCGGAGACGTACTCC---CTCCTGATCGATACCTACATCAAGGAG 76457 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 || || | ||||| ||||| || ||| || ||||| | ||| Sbjct 76458 CCTGCTCAGCGCACGTACCTGTTCAACGCCATTGATACCATTCCTTGCATCCGCCGCAAG 76517 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || |||||| |||||||||| | | | || | || |||| | |||| ||||| Sbjct 76518 GCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAGTCGACCTTTGCCCAGCGTCTGGTT 76577 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT- 25946 ||||||||||| || ||||| ||||| ||| ||| | ||||| | ||||| ||||| Sbjct 76578 GCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTTTGGCTG 76637 Query 25947 --CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 ||||| || | |||||||| || ||| || |||||||| ||| | | || Sbjct 76638 CGCAAGC---GTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGTGAT 76694 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 |||||||| |||| || ||||||||||| || | | | |||||| | || || Sbjct 76695 GAGGGTCTTCACACCGACTTTGCCTGCCTTCTTTTCTC---TCACTTGAACAAC-CGCCC 76750 Query 26065 TCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123 | |||| || || | || |||| || || || | |||||||||||||| | Sbjct 76751 TAGCAAGCAGTTGATCCAGGACATTATCACTGATGCCGTTGTTATCGAGAAGGAGTTCCT 76810 Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACA 26182 | || |||||| | || ||||||| |||| Sbjct 76811 TACTGAGGCTCTTCCCTGCGCTCTTCTTGGTATGAAC-GCTGACCTCATGAAGACTTACA 76869 Query 26183 TTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 | |||| || ||||||| ||| || ||| | || || || || | |||| | Sbjct 76870 TCGAGTTCGTCGCCGACCGTCTTCTGGTGGC-TCTCGGCAACGACAAGGTGTACAAGGCT 76928 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 ||||||| |||||||||||||||||||| || | | || |||||||||||||| || Sbjct 76929 TCTAACCCCTTCGACTTTATGGAAAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAG 76988 Query 26302 AAGAGGGTCGGCGACTATCA 26321 ||| | ||||| ||||| || Sbjct 76989 AAGCGTGTCGGTGACTACCA 77008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840562145600