Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq59 215 6e-51
seq38 96.9 4e-15
seq17 91.5 2e-13
>seq59
Length=151500
Score = 215 bits (238), Expect = 6e-51
Identities = 943/1471 (64%), Gaps = 51/1471 (3%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||||||| |||| ||| | || |||| | ||||||| ||| || |||| | |
Sbjct 87763 TACTTTGGTTTCAAGACCTTGGA-AAGATCCTATCTTCTCAAGCTTGACGGCAAGATTGT 87705
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
|| || ||| ||||| | ||||| || || |||| ||| || || | ||||
Sbjct 87704 TGAGCGTCCTCAGCACATGATTATGCGTGTAGCTGTCGGTATCTGGGGTGACAATGTTGA 87645
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||| |||| || ||| || ||||| |||| | | ||| ||| ||| | ||
Sbjct 87644 GCGTGTTCTGGAAACTTACAACCTCATGTCGAGCAAGTTCT--TCACTCATGCATCTCCT 87587
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
||||||||||| |||||||| || || ||| | || ||||||| | | | ||
Sbjct 87586 ACCCTCTTCAACGCTGGTACTCCCCAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGACATG 87527
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAA 75440
||||||||| ||| | |||||||||| || || | | | | ||||| | ||||| |
Sbjct 87526 AAGGAGGACAGTATCGAAGGTATCTATGACACCCTCAAG-ACT-TGCGCTATGATCTCCA 87469
Query 75441 AGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTC 75500
|| ||| || || ||||| | || | || | | | || | | ||| |||
Sbjct 87468 AGATGGCGGGTGGCATTGGTCTCAACGTACACCGTATCCGTGCTACTGGTTCTTACATTG 87409
Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560
|| || || ||| || | |||||| |||| ||| | || || || ||| || |
Sbjct 87408 CTGGCACCAACGGTACCTCGAACGGTATTGTTCCCATGTTGCGTGTCTTCAACAATACTG 87349
Query 75561 CGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGG 75614
| || || || |||| | || ||||| | || | | || | ||| |||
Sbjct 87348 CTCGTTACGTCGATCAGGGTGGTAACAAGCGTCCC---GGTGCTTTTGCCATTTACCTGG 87292
Query 75615 AACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAG 75674
| || ||||| || ||| | | ||||||||||| | || ||||| ||| | || |
Sbjct 87291 AGCCGTGGCACGCTGATGTGTTCGAGTTCCTTGATCTCCGGAAGAACCACGGTAAGGAGG 87232
Query 75675 AGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734
|| ||| | | ||| | || || |||||||||| || | ||||||||||| |
Sbjct 87231 AGATTCGTGCTCGCGATTTGTTCCTTGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTG 87172
Query 75735 TTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC- 75793
||||| || || | ||| |||| | || || || || || || || | |||
Sbjct 87171 TTGAGAAGAACGGCAACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACT 87112
Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853
|| ||| || || ||||| || ||||| || ||||| ||| ||||||| | | |
Sbjct 87111 GCTATGGC-GATGAATTTGAGGCTCTCTATACCAAGTACGAACAGGAGGGACGTGGC--- 87056
Query 75854 GCGACTGTACCA----GCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGA 75908
|| ||| |||| | | | || | | ||| | ||||| | | | ||||| ||||
Sbjct 87055 -CGTCTG-ACCATTAAGGCCCAGAAGCTGTGGTATGCTATCTTGGAGGCTCAGACTGAGA 86998
Query 75909 CTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATT 75968
|||| | || | ||||| ||||||||| || ||| ||||||||||| |||||
Sbjct 86997 CTGGTAACCCTTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGTAACCAGAAGAACC 86938
Query 75969 TGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATG 76028
||||||| || || || || |||||||| || || | |||||| | | ||||
Sbjct 86937 TGGGAACTATTCGCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGCGCTCCCGATG 86878
Query 76029 AGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTC 76088
|| || || ||||| |||| || | || ||||| | ||| | | | |
Sbjct 86877 AGGTTGCCGTGTGCAACCTGGCTTCTCTTGCTCTTCCTGCCTTTGTTGACTACAACAACA 86818
Query 76089 GCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148
| | | || | | || || || || |||| ||| | ||| || | ||||
Sbjct 86817 ACTCCTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTCGTTGTTCGCAACTTGAACC 86758
Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGAC 76205
| | ||||| || || |||||| ||| || || || || ||||| |
Sbjct 86757 GCATTATTGATGTGAACCACTACCCCGTTATCGAG---GCCCGTAACAGCAACATGCGCC 86701
Query 76206 ACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACG 76265
|| | || || ||| | |||||||| ||||| || |||| || | ||| || ||
Sbjct 86700 ACCGCCCCATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCTG----GCC-CTTCG 86646
Query 76266 CAT-----TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTA 76320
||| |||| || | ||| ||| || | || | |||||||| ||||| ||
Sbjct 86645 CATGCCTTTTGAGTCTGCTGAGGCCCGTCAGCTCAACAAGCAGATCTTTGAGACCATTTA 86586
Query 76321 TCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATT 76380
||||| |||| |||||| || || | ||| ||||| |||| ||| |
Sbjct 86585 CCACGCTGCCCTCGAGGCGTCGTGCGATATTGCTATTCTTGAAGGTCCCTACTCGACCTA 86526
Query 76381 TGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA 76440
||||||||||| | || || || | |||||||| || ||||||| | || | || |
Sbjct 86525 CGAGGGTTCTCCTGTCTCTCAGGGTATCCTTCAGTTCGACATGTGGG-ATGTTACCCCCA 86467
Query 76441 GCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 76498
| | | | | |||||| | | | ||||| | |||||| || | ||| |||| |||
Sbjct 86466 G-TGACCTGTGGGACTGGAACTCTTTGAAGGACCAGATCAAGCAGCACGGTGTTCGCAAC 86408
Query 76499 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 76558
||| | |||| || ||||| |||||||| || | || || ||||||| || ||
Sbjct 86407 TCCCTTCTTTTGGCCCCTATGCCCACAGCCTCGACGTCCCAGATTCTGGGTAACAACGAG 86348
Query 76559 TGCTTTGAACCATACACAACAAACATCTACC 76589
||||| || || ||||| | ||||| ||||
Sbjct 86347 TGCTTCGAGCCTTACACTTCCAACATTTACC 86317
>seq38
Length=199572
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 65026 AAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCT 65084
||||| | ||||| |||| ||| || | |||| | ||| |||| ||| |||| ||
Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAGTCGA-CCTTTGCCCAGCGTCT 76573
Query 65085 TTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTG 65144
|||| ||||| || ||||||||||||||||| || | || | |||| | |||
Sbjct 76574 GGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCTTTTG 76633
Query 65145 GTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGA 65204
| || ||||| ||| | ||||| || | ||||||||| || || || ||||| ||
Sbjct 76634 GCTGCGCAAGCGTGGTATGATGCCCGGTTTGACCTTCTCAAACGAGCTGATCTCCCGTGA 76693
Query 65205 TGAGGGTCTCCACCAGGAGTTTGCC 65229
||||||||| ||| || ||||||
Sbjct 76694 TGAGGGTCTTCACACCGACTTTGCC 76718
>seq17
Length=280677
Score = 91.5 bits (100), Expect = 2e-13
Identities = 199/291 (68%), Gaps = 8/291 (3%)
Strand=Plus/Minus
Query 13605 AGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCT 13664
|||||||||| ||| | || || ||||| ||||| || | | || ||||| ||||
Sbjct 146863 AGTGTACTCTGATTCTGACCGAAGGTGACTCGGCCAAGTCTTTGGCCGTTGCTGGTCGTG 146804
Query 13665 CTGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAA-ATGTAAGAATGTT 13723
| | | | || ||| | | ||||| |||||||| || ||||| ||| || |||
Sbjct 146803 CCATTTTGGATCCTGACCGCATTGGTGTTTTCCCACTCCGTGGTAAGATGCTC-AACGTT 146745
Query 13724 CGGGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAG-TTCAACGATCTCAAGAAGAT 13782
|| || ||||| ||| ||| | || |||||||| ||||| || |||| || |
Sbjct 146744 CGTGATGCTTCTTTGGACCAGATTACCAAGAACCAGGAAATTCAAA-ATATCAAACAGTT 146686
Query 13783 CCTTGGTCTTCA--ACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGT 13840
| | |||||| | |||||| | | ||| ||| | ||||| ||||||| |
Sbjct 146685 CTTGGGTCTTAAGCACAAGGCA--GTTTACACGGATACCAAGGGGCTTCGTTATGGTCAT 146628
Query 13841 CTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTC 13891
|| ||||| ||| | ||| ||| | |||||||| || ||||||||||||
Sbjct 146627 CTGATGATCATGGCCGATCAGGATCACGATGGTTCGCATATCAAGGGTCTC 146577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566878151200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |