Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq59 154 4e-32
seq38 118 3e-21
seq100 89.7 2e-12
seq37 86.0 2e-11
>seq59
Length=151500
Score = 154 bits (170), Expect = 4e-32
Identities = 594/926 (64%), Gaps = 13/926 (1%)
Strand=Plus/Plus
Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAAT 155641
|||| ||| ||| ||||| || || || ||| ||| | | ||| ||| || | ||
Sbjct 86843 AAGAGCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTACTCGATGAT 86902
Query 155642 CTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTT 155701
|||| ||| ||||| ||||| || || || | |||||||||||| || | |||
Sbjct 86903 CTCAGTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTT 86962
Query 155702 ACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTT 155761
|| ||||||||| || ||| | ||| | || ||||| |||| || |||| ||
Sbjct 86963 GCAGTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGC 87022
Query 155762 TAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCAT 155821
||| || | |||| ||||| | | | || ||| || || || |
Sbjct 87023 ATACCACAGCTTCTGGGCCTTAATGGTCAGACGGCCACGTCCCTCCTGTTCGTACTTGGT 87082
Query 155822 ATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCA 155881
||| || | | || || || || || ||| ||| |||||||||| | ||||||
Sbjct 87083 ATAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCA 87142
Query 155882 AAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCCCA 155938
| || | ||| | || || | | |||||| ||| || | |||| |||
Sbjct 87143 CATGAGAGTCCAGTTGCCGTTCTTCTCAA---CACGCTTCATGAACAAATCAGGAATCCA 87199
Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998
| ||| ||| | || | || |||||| | ||||| |||||||| || ||
Sbjct 87200 CAAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATC 87259
Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCT 156058
| ||| || | ||||| || |||||||| || || |||||| ||| |
Sbjct 87260 AAGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACCGGGACG 87319
Query 156059 CTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115
|||| ||||||||||| || || |||||||| || |||||||||| | ||| ||||
Sbjct 87320 CTTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAAC 87379
Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175
|||||| || || || || ||||| || ||| | ||||||| | || | | ||
Sbjct 87380 AATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTG 87439
Query 156176 AATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234
| | || ||||| ||||| | |||| || || || |||||| ||| | || |
Sbjct 87440 TACGTTGAGACCAATGCCACCCG-CCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGT 87498
Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAG 156294
| |||||||| ||| || || | ||| || | |||| ||| | || |
Sbjct 87499 CATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGG 87558
Query 156295 GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACA 156354
| | || || ||||||||||| || ||||| | ||||||| | || |||| | ||||
Sbjct 87559 GCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACA 87618
Query 156355 TATAATCGTATGTCTCCTTAATCTTCTCAAGATT-AGACCCGTGAATACAGATAGAGACC 156413
| | ||| || ||| || ||||| ||| |||| | |||| || || ||
Sbjct 87619 TGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCAG-ATACCGACAGCTACA 87677
Query 156414 CTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCG 156473
| ||| ||| |||||||||||||| |||||| || |||| ||||| || |
Sbjct 87678 CGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGAT 87737
Query 156474 CGTTCCAGAGTTTTAAACCCGAAATA 156499
| ||||| || || || || || ||
Sbjct 87738 CTTTCCAAGGTCTTGAAACCAAAGTA 87763
>seq38
Length=199572
Score = 118 bits (130), Expect = 3e-21
Identities = 343/523 (66%), Gaps = 4/523 (1%)
Strand=Plus/Plus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| ||||| |||||| || | |||||| |||||| || || || || || |
Sbjct 76366 CCGAGGCCCGCTGCTTTTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACGT 76425
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423
| || || || ||||| |||||||| || | | ||| |||| || | ||||||
Sbjct 76426 ACTCCCTCCTGATCGATACCTACATCAAGGAGCCTGCTCAGC-GCACGTACCTGTTCAAC 76484
Query 133424 GCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
|||||| ||||||| || || | |||||||| | || |||||
Sbjct 76485 GCCATTGATACCATTCCTTGCATCCGCCGCAAGGCCGACTGGGCCCTGAAGTGGATTACC 76544
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|||||| ||| ||||| ||||| ||||| ||||||| || ||||| || ||
Sbjct 76545 GACAAGGAGTCGACCTTTGCCCAGCGTCTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTC 76604
Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603
||| |||||| || |||||| |||||||| ||||||||||| | || || ||
Sbjct 76605 TTCTCTGGTGCCTTTGCCTCTATCTTTTGGCTGCGCAAGCGTGGTATGATGCCCGGTTTG 76664
Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663
|| || ||||| || || || | || |||| ||||||||||| |||||| |
Sbjct 76665 ACCTTCTCAAACGAGCTGATCTCCCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTT 76724
Query 133664 CTTCACTCTAAATTAGAGCGACCACTC-AAAAAGAATAAGATTGAAGAAATTATTAGAGA 133722
||| |||| | || || | ||| | | | ||| | ||| | || ||||| | ||
Sbjct 76725 CTTTTCTCTCACTT-GAACAACCGCCCTAGCAAGCAGTTGATCCAGGACATTATCACTGA 76783
Query 133723 AGCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCCGTGCCGTTTAATTGGTAT 133782
|| |||| || ||| || || | | | ||||| || ||| | | |||||||
Sbjct 76784 TGCCGTTGTTATCGAGAAGGAGTTCCTTACTGAGGCTCTTCCCTGCGCTCTTCTTGGTAT 76843
Query 133783 GAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGAC 133825
||| | || || ||| || ||| || || || || || |||
Sbjct 76844 GAACGCTGACCTCATGAAGACTTACATCGAGTTCGTCGCCGAC 76886
>seq100
Length=82169
Score = 89.7 bits (98), Expect = 2e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATC 233328
||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 32764 AGCACCGTGGGCAATCATACAATCACGTTCCATTTCACCGAAACGCAGACCACCATC 32820
Score = 87.8 bits (96), Expect = 5e-12
Identities = 332/512 (65%), Gaps = 18/512 (4%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 32765 GCACCGTGGGCAATCATACAATCACGTTCCATTTCACCGAAACGCAGACCACCATCTCTG 32824
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|| | ||| || | ||||| | || | | | || |||||| | || ||
Sbjct 32825 GCACGACCTTCCACCGGCTGTCTGGTCATAATCTGCACCGGACCGCGAGCACGAGCGTGA 32884
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA----T 251660
||| || | |||||| || |||||||||||| ||| || || | ||| | |
Sbjct 32885 ATCTTGTCGTCTACCATGTGACGAAGACGCTGGTAGTATGTAGGGCCAAAGAATACTTGT 32944
Query 251661 GCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
|||| || || | ||||| | ||| |||| | | || ||| ||| |
Sbjct 32945 GCTCTCAG---CTTAC-GACCAGTGTGGCCGTGGTACAAAGCCTCAAAACCACGAGACTG 33000
Query 251721 ATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACT 251777
||||| ||| | | ||| | || | ||| || ||| | | ||
Sbjct 33001 GTAACCGTGTTGACGCAGCAGCGCAGAGACTGAATCGACA---GTGACATCAGTGAATGG 33057
Query 251778 GGTGCCGTCTCCGTAAAGACCCATTTGAATCAAC-ACTTTGCCTAAAAGTGTCTCTTTCA 251836
|| | || || | | |||| || | | | || || | ||||| ||| |||
Sbjct 33058 CGTAGCATCACCCTCCATACCC-TTCAACGTAGCAACCTTACTCAAAAGACACTCAATCA 33116
Query 251837 GTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCA 251896
||||| || ||||||||| ||||| || ||||| || |||||||| ||||| | |
Sbjct 33117 AATGGGCAATCGTCATACGAGAAGGAATGGCGTGGGGGTTAATGATGATATCGGGAGTGA 33176
Query 251897 GTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTT 251955
|| ||| ||| || |||||||||| || || ||| | ||||| || |||||
Sbjct 33177 TACCCTCACGAGTAAAAGGCATATCCTCTT-GTCTGTAAGTAACACCAATGGTACCCTTC 33235
Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| |||||||| ||| ||||| ||||||||
Sbjct 33236 TGCCCGTGACGGGAAGCAAACTTGTCACCAAT 33267
>seq37
Length=199617
Score = 86.0 bits (94), Expect = 2e-11
Identities = 109/149 (73%), Gaps = 6/149 (4%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||||| ||||||| ||||||||||||||||||||| | ||| |||||||| ||
Sbjct 132350 GCACCGTAGGCAATCAAACAATCACGTTCCATTTCACCCAGACGGAGACCACCCTCGCGG 132291
Query 233333 GACCTACCCTGGACTGTT---TGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAA 233389
|| | ||| | ||||| ||||| || || | | |||||| | |||| |
Sbjct 132290 GAACGACCTT---CTGTTGGCTGACGGGTCAACGAGGCACGTGGACCGGTGGAACGAGAG 132234
Query 233390 TTAATTTTATCTTTAACCATATGCTTCAG 233418
| |||||||||| |||||| ||||||||
Sbjct 132233 TGCATTTTATCTTGAACCATGTGCTTCAG 132205
Score = 84.2 bits (92), Expect = 6e-11
Identities = 116/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541
|| ||||||| | ||||| ||||||||| ||||||||||| | ||| |||||||| |||
Sbjct 132353 GAGGCACCGTAGGCAATCAAACAATCACGTTCCATTTCACCCAGACGGAGACCACCCTCG 132294
Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCA-TAGGACCGATGGAGCGGCT 251600
|| | | ||| || | |||||||| || | | | || |||||| |||| ||
Sbjct 132293 CGGGAACGACCTTCTGTTGGCTGACGGGTCA-ACGAGGCACGTGGACCGGTGGAACGAGA 132235
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640
|| ||||| | ||||| ||||| ||||| ||||||
Sbjct 132234 GTGCATTTTATCTTGAACCATGTGCTTCAGACGTTGGTAG 132195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810716953005
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