Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq59 203 3e-47 seq24 93.3 4e-14 >seq59 Length=151500 Score = 203 bits (224), Expect = 3e-47 Identities = 968/1519 (64%), Gaps = 46/1519 (3%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || ||||| ||||| || || || |||||||||| ||| ||||||| || Sbjct 86286 ACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGCTCGAAG 86345 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| ||||||||||| | ||| | || || ||||| |||| | ||| Sbjct 86346 CACTCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAAAGAAGG 86405 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || || || | |||||| ||||||| | ||||| | || ||||||||||| || Sbjct 86406 GAGTTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTTCCAGTCCCACAGGTCA 86465 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 || || | | |||||| ||| |||| | || ||| | | ||| || ||| Sbjct 86466 CTGGGGGTAACATCCCACATGTCGAACTGAAGGATACCCTGAGAGACAGGAGAACCCTCG 86525 Query 138748 TACGAATCGTATACACC--AAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCAT 138805 || | ||| ||| || | || | ||| ||||||||| ||| | | Sbjct 86526 TAGGTCGAGTAGGGACCTTCAAGAAT--AGCAATATCGCACGACGCCTCGAGGGCAGCGT 86583 Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865 |||||| || || ||||||| |||||| |||||||| || ||| | |||| Sbjct 86584 GGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGACGGGCCTCAGCAGACTCAAAAGGCA 86643 Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925 |||| || | ||| || || ||||| || || || || || |||| ||||| |||| Sbjct 86644 TGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGTGGC 86703 Query 138926 GCAGATTTGACGCTTTTGC-GGCTTCGATA---GGATAATAGTTTACATCGATGATTTTG 138981 ||| || ||| || | ||| |||||| || || | ||| ||||| || || | Sbjct 86704 GCA----TGTTGCTGTTACGGGCCTCGATAACGGGGTAGTGGTTCACATCAATAATGCGG 86759 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCC 139040 || || || || || || ||||| || || | | | | | | || ||||| | Sbjct 86760 TTCAAGTTGCGAACAACGACCTTGGTGACAT-CGTGCAGCTTCTGGAAGTCGTAGG---- 86814 Query 139041 CCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACAC 139100 ||||| || | ||| ||||| | | || || || | ||||||||| Sbjct 86815 --AGTTGTTGT---TGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCACAC 86869 Query 139101 CGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGAT 139160 || || || ||||| ||| ||| |||| || || | || | || || || Sbjct 86870 GGCAACCTCATCGGGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGAAT 86929 Query 139161 CGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGG 139220 || || | || | || || || || ||||| || ||| ||||| ||||| | || Sbjct 86930 AGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGG 86989 Query 139221 TGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTG 139280 | ||||| || || | ||| | || | ||| | | || | || | | Sbjct 86990 GTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCACAGCTTCTGGGCCT-TAATGG 87048 Query 139281 ACGCAC-GTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGT 139339 | || | | || | || | |||||||| ||||| | || ||| || || | Sbjct 87049 TCAGACGGCCACGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCAT 87108 Query 139340 AGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCT 139399 || ||||| || | | |||| || || |||||||| | ||| ||||||| || Sbjct 87109 AGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCT 87168 Query 139400 TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT 139459 || ||| ||||||||| ||| ||||||||||| || | | ||||||||| || Sbjct 87169 CAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAA 87228 Query 139460 TATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCA 139517 | || ||| ||| ||| || | | | |||||| || || || ||||||||||| Sbjct 87229 TCTCCTCCTTACCGTGGTT--CTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCA 87286 Query 139518 TGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCG 139574 || ||||| || ||||| | || || || ||| ||||| |||||||||| || Sbjct 87287 CGGCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTAACG 87346 Query 139575 TACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCT 139634 ||| ||| ||||| || |||||||| || | | |||| ||| || |||||||||| Sbjct 87347 AGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCC 87406 Query 139635 ACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCC 139691 | ||| | || | ||| |||| ||||| |||| || || || || | Sbjct 87407 AGCAATGTAAGAACCAGT---AGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGC 87463 Query 139692 AAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGT 139750 | ||||| || | | ||||| || | | || || || |||||| || ||||| | Sbjct 87464 CATCTTGGAGATCATAGCGCAAGTCTTG-AGGGTGTCATAGATACCTTCGATACTGTCCT 87522 Query 139751 CCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACA 139810 ||| ||| |||| ||||| || ||||| || || | || || || || | Sbjct 87523 CCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGA 87582 Query 139811 GAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC--GATGGC 139868 | |||||| || || ||||| | | ||||||| | | ||| ||||| || | Sbjct 87583 GGGTAGGAGATGCATGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACAC 87642 Query 139869 GCTC-ACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCC 139927 |||| ||| | || || ||||||||||| || ||||| | ||| || || | Sbjct 87643 GCTCAACATTGTC---ACCCCAGATACCGACAGCTACACGCATAATCATGTGCTGAGGAC 87699 Query 139928 GTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAA 139987 | || | | | ||| || | || ||||| | || | ||||||| | |||| Sbjct 87700 GCTCAACAATCTTGCCGTCAAGCTTGAGAAGATAGGATCTTTCCAAGGTCTTGAAACCAA 87759 Query 139988 AGTACCTATAGTTGAAATC 140006 ||||| |||||||| || Sbjct 87760 AGTACTGGTAGTTGAAGTC 87778 >seq24 Length=264051 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || || || || || || | Sbjct 249886 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 249945 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 249946 GACACCATTGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAG 250005 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || || || || ||||| |||||| | | | | || || || ||| Sbjct 250006 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 250065 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 250066 ATTCAGAAGGAGTCTACTCTCCAC 250089 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| || || || || | | Sbjct 250114 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTCGAGTCGTCA 250173 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 250174 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 250233 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| || ||||| || ||||| |||||| | | | || ||||| ||| Sbjct 250234 CAGCGTTTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCGGATTACAAC 250293 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 250294 ATCCAGAAGGAGTCCACTCTTCACTTGGT 250322 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || ||||| || | | Sbjct 250342 ATGCAGATCTTCGTGAAGACTCTCACTGGAAAGACCATCACTCTTGAAGTCGAGTCTTCT 250401 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || ||||| || Sbjct 250402 GATACCATTGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAG 250461 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||||||||| | | | |||| || || ||| Sbjct 250462 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAAC 250521 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || ||| |||| Sbjct 250522 ATCCAGAAGGAGTCCACTCTCCACCTGGT 250550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895547342200