Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq19 116 6e-20
seq38 105 1e-16
seq11 89.7 8e-12
seq80 87.8 3e-11
seq59 87.8 3e-11
>seq19
Length=274706
Score = 116 bits (128), Expect = 6e-20
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| |||||||| | ||||||||||| || || || | || |||||||| || || |||
Sbjct 249995 GCCTCCAACTACTTGGACATCAAGCCTCTTCTTGACGTTGGATGCAAGACTGTCGCGAAC 250054
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 250055 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTCAACAT 250101
>seq38
Length=199572
Score = 105 bits (116), Expect = 1e-16
Identities = 94/118 (80%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 796299 GTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCG 796358
||| | ||||||||| ||||| || |||||||||||||| |||||||| | ||| |||
Sbjct 76220 GTCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCTC 76161
Query 796359 TTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416
||||| ||||||||| || || ||||| ||||||||||| | || || ||||||
Sbjct 76160 ATGGTACTTGATGGGGAAGAGCACGAAGCGGTTGGGGTTCTCTTGCAGGAGGGGCTCG 76103
Score = 98.7 bits (108), Expect = 2e-14
Identities = 179/259 (69%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| |||||| |||||||||||||| ||||
Sbjct 77021 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 76962
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
||||| ||||| | ||| ||||| | | | ||| ||| ||| |||||
Sbjct 76961 GGAGATGTTTTCCATAAAGTCGAAGGGGTTAGAAGCCTTGTACACCTTGTCGTTGCCGAG 76902
Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071
| | | || || |||||||||||||| || ||||| ||||||| | ||||||||
Sbjct 76901 AGCCACCAGAAGACGGTCGGCGACGAACTCGATGTAAGTCTTCATGAGGTCAGCGTTCAT 76842
Query 794072 GCC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|| || |||||| ||| || | ||| | | ||||| |||||||| | |||||
Sbjct 76841 ACCAAGAAGAGCGC--AGGGAAGAGCCTCAGTAAGGAACTCCTTCTCGATAACAACGGCA 76784
Query 794130 TCGATGATGATCTGCCTGG 794148
|| |||| || | |||||
Sbjct 76783 TCAGTGATAATGT-CCTGG 76766
>seq11
Length=365525
Score = 89.7 bits (98), Expect = 8e-12
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| || |||||||||||||| |||||||||||| ||||||| || ||| | |
Sbjct 14955 GTACTTGGTAACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGAAG 14896
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTC 1485557
||| || || || | |||||| |||||
Sbjct 14895 GATGAGACGGACAGAGGTCTGAATCTC 14869
>seq80
Length=110433
Score = 87.8 bits (96), Expect = 3e-11
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
|||||||||||||| || || || ||||||||||| | || ||| || ||
Sbjct 8930 AGATCAATCTTGGACTTGGGGTCAGAGGAACTCATCTTGCCACC---GGAGAGACCAGGA 8986
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502
|||| ||||| | || |||| ||| || | | || ||| |||| ||| |
Sbjct 8987 ACCATGGGGTTCATCAAGTGGCAGCGGTTCTTGAAACCAAGCTTAGGCATAGCATCGTGA 9046
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
| | | ||||||||||||||||||| | || || |||| |||||| || |||||| |
Sbjct 9047 GACAGGCCAAAGATCTTGCGCTGGTCAAGACCACCGAACTCGGCGTCAACACCGAGGTAC 9106
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTA 2411591
| ||| || || ||||||||| |||||
Sbjct 9107 TCCTCATCCAGAAGCTGCATGAGTGGGTA 9135
>seq59
Length=151500
Score = 87.8 bits (96), Expect = 3e-11
Identities = 174/258 (67%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| ||||| || || || || | ||| ||||| || | |||||| |||| ||||| ||
Sbjct 87332 CTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGA 87391
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| || | ||| | || | || || | ||| || | ||
Sbjct 87392 GGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACC 87451
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||||| || ||| ||||||||| | ||||| | || || || || ||||| || ||
Sbjct 87452 AATGCCACCCGCCATCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTC 87511
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||||||||| | || ||||| || || || || | | || ||
Sbjct 87512 GATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACC 87571
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|| |||||||| || ||
Sbjct 87572 AGCGTTGAAGAGGGTAGG 87589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916207573285235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |