Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq24 134 9e-27
seq14 132 3e-26
seq96 127 1e-24
>seq24
Length=264051
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||||||||| ||||| || ||| |||| ||||
Sbjct 250097 AGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 250038
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||| ||||| || |||||||| | || | |||||||||||
Sbjct 250037 TCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 249978
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | ||| || ||| || |||| ||| ||||||
Sbjct 249977 TGGATCTTGGACTTCACGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTC 249918
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| ||||||||||||||
Sbjct 249917 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 249886
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | ||| ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 250553 AGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCC 250494
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || ||||| || || |||||||| | || | |||||||||||
Sbjct 250493 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 250434
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | ||| | |||||| |||| || ||||||
Sbjct 250433 TGGATCTTGCTCTTCACGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTC 250374
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || |||||||||||
Sbjct 250373 TTTCCAGTGAGAGTCTTCACGAAGATCTGCAT 250342
Score = 118 bits (130), Expect = 7e-22
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||||||||||||||| ||||| || ||| |||| ||||
Sbjct 249869 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCATCC 249810
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| ||||| || || || |||||||| | || | |||||||||||
Sbjct 249809 TCAAGCTGCTTTCCAGCGAAAATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 249750
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || |||||| || | ||| ||||||
Sbjct 249749 TGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 249690
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 249689 TTGCCGGTGA 249680
Score = 118 bits (130), Expect = 7e-22
Identities = 157/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| || ||||| || | || ||||
Sbjct 250325 AGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTACGGCCATCC 250266
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| |||| || |||||||| | || | |||||||||||
Sbjct 250265 TCAAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 250206
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | |||||| |||| ||| ||
Sbjct 250205 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCTGACGACTCGACCTCAAGGGTAAT 250150
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || |||||||| || |||||||||||
Sbjct 250149 GGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 250114
>seq14
Length=289536
Score = 132 bits (146), Expect = 3e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 256420 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 256361
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 256360 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 256301
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || |||||| || | ||| ||||||
Sbjct 256300 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAGGGTGATGGTC 256241
Query 34946 TTTCCCGTGAGGGTCTTTACAAA 34968
|| ||||| |||||||| || ||
Sbjct 256240 TTACCCGTCAGGGTCTTGACGAA 256218
>seq96
Length=85826
Score = 127 bits (140), Expect = 1e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| |||| |||| ||||| ||||| || |||||||
Sbjct 59304 CCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 59363
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 59364 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 59423
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || | |||||| |||| ||| || ||||| ||||| |||||||| || |
Sbjct 59424 CGATCGTGTCCGAAGACTCGACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTAACGA 59483
Query 34968 AGATCTGCAT 34977
| ||||||||
Sbjct 59484 AAATCTGCAT 59493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691351175935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |