Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq24 102 6e-17
>seq24
Length=264051
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || || || || |||||||| || || | | ||||||
Sbjct 250101 ACGAAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCC 250042
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || |||||||| | |||| | ||||| ||||| ||||||||||| ||
Sbjct 250041 ATCCTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTT 249982
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | |||||||| || || ||||| || ||
Sbjct 249981 GTCCTGGATCTTGGACTTCACGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGAT 249922
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | ||| || ||||| ||||||||
Sbjct 249921 GGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 249886
Score = 84.2 bits (92), Expect = 2e-11
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
||||| ||||| || || |||||||| || || | | ||||||| ||| || || ||
Sbjct 249860 TGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCATCCTCAAGCTGC 249801
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| ||||| | || | | ||||| ||||| ||||||||||| ||||| || ||| ||
Sbjct 249800 TTTCCAGCGAAAATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG-AATCTT 249742
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| ||||| | || | |||||| || || || || || || || || ||||| ||
Sbjct 249741 GGACTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 249682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217486376465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |