Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq59 167 2e-36
seq24 120 3e-22
seq14 111 2e-19
seq38 109 5e-19
seq96 104 2e-17
>seq59
Length=151500
Score = 167 bits (184), Expect = 2e-36
Identities = 742/1155 (64%), Gaps = 50/1155 (4%)
Strand=Plus/Plus
Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT- 148103
|| |||||||| ||| ||||| || || ||||| || || ||||||| || | ||
Sbjct 86067 TTCAACGACTGAGACTGATCAATAAAGGCACCACGATCGGCCGCCATTTGAACAACAGTG 86126
Query 148104 CGCTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCG 148163
|||| |||||||| ||||||||||||| |||||| | | | ||||||| |
Sbjct 86127 CGCTGAGAA---ATCTCCCAAACCGTCTTGTACAGAGACTTGATGTCAGCAGGAATGCTG 86183
Query 148164 TCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTAT 148223
|||| ||| | || ||| || | || || | || ||| | ||| | |
Sbjct 86184 GGGATGTTCTGGATAGAACCGTTGTCGGAAATGATACGGTTCTTCATGTTGTCGGACCAC 86243
Query 148224 AGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCG 148283
|| || || | ||||||| | || || | || || ||||| ||||| || ||
Sbjct 86244 AGACCAAGGTCAACCAGGTCACGAAGCAACCACGGGTTGACAACCTGGAACTCACCAGCC 86303
Query 148284 AGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343
| ||| || ||| | || | |||| || | || || || |||||||||| |||| |
Sbjct 86304 AACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGA 86363
Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403
||||| | |||| || |||||||| || | || || |||||||| | |||| |
Sbjct 86364 ATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAAAGAAGGGAGTTGCGAACACCGTGC 86423
Query 148404 TTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCC 148461
| || || | | ||||| || ||||||||| | || || || || || | ||
Sbjct 86424 TGCTTGATCTGGTCCTTCAAAGAGTTCCAGTCCCACA--GGTCACTGGGGGTAACATCCC 86481
Query 148462 ACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGT 148520
|||||||| |||| || || || | | || | || |||||||| | ||| ||
Sbjct 86482 ACATGTCGAACTGAAGGATACC-CTGAGAGACAGGAGAACCCTCGTAGGTCGAGTAGGGA 86540
Query 148521 CCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCA 148580
|| | || | ||||| ||||||||| || ||| |||||| |||||
Sbjct 86541 CCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGGCAGCGTGGTAAATGGTCTCAAAG 86600
Query 148581 ATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAAC 148640
|| ||| |||||||| | ||| | || | ||||| || || || ||
Sbjct 86601 ATCTGCTTGTTGAGCTGACGGGCCTCAGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAG 86660
Query 148641 GCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC 148700
|| || || || ||||| || || || || ||||| ||||| |||||| | ||
Sbjct 86661 GCATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTACGG 86720
Query 148701 GCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGAT-CTTGTCAAGATTGCGCACCACCA 148758
|| ||| | | || |||||||| || || || | ||||| ||||| || || |
Sbjct 86721 GC-CTCGATAACGGGGTAGTGGTTCACATCAATAATGCGGTTCAAG-TTGCGAACAACGA 86778
Query 148759 CCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA---------CTTGTCATCTAC-GATG 148808
|||| || | | ||||| | || ||||| |||| || || | |
Sbjct 86779 CCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAGGAGTTGTTGTTGTAGTCAACAAAGG 86838
Query 148809 CATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTAC 148868
|| || | || | ||| || || ||||||||||| |||||| || |||| ||||
Sbjct 86839 CA--GG--AAGAGCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTAC 86894
Query 148869 TCTACGATCTCGGCGCACAGATTG---CTGC-ATTTGATCACGCCCACGTTCTTTTGATT 148924
|| | |||||| | ||| || ||| |||| | | | | |||| |||||| || ||
Sbjct 86895 TCGATGATCTCAGTGCAAAGGTTGGAACTGCGAATAGTT----CCCAGGTTCTTCTGGTT 86950
Query 148925 GCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGT 148984
||||||| |||||| ||||||||||||||| | || ||||| || ||| |
Sbjct 86951 ACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGC 87010
Query 148985 TTCCACTATGAACCGA-TGCAGGTCCTGCGCGCGCACTTGCTGCTC-----GTAGCGACC 149038
|||| || | | | ||| | ||| || ||| || || | || ||
Sbjct 87011 CTCCAAGAT-AGCATACCACAGCTTCTGGGC-----CTTAATGGTCAGACGGCCACGTCC 87064
Query 149039 CTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACC 149098
|||||| ||||| ||||| || ||| || | ||||| ||||| || | || ||
Sbjct 87065 CTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCATAGCAGTCAGCCAGGCC 87124
Query 149099 GGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAA 149158
||||||| || ||||||||||| | ||| ||||| | | || |||||||| ||
Sbjct 87125 AGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAA 87184
Query 149159 CAGATCGGGCACCCA 149173
|| ||| || | |||
Sbjct 87185 CAAATCAGGAATCCA 87199
>seq24
Length=264051
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | ||| | | | ||||| |||||||||||
Sbjct 250082 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 250024
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| || ||||||||||| ||||| || || |||||||| |||||| |||
Sbjct 250023 AGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTT 249964
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| ||||| | || ||| || || | ||||| ||| ||||| ||||| ||
Sbjct 249963 CACGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGT 249904
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 249903 CTTGACAAAGATCTGCAT 249886
Score = 114 bits (126), Expect = 1e-20
Identities = 132/175 (75%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| ||| | ||| ||| | ||||| |||||||| |
Sbjct 249855 GGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCA-TCCTCAAGCTGCTTTC 249797
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| || ||||||||||| || || || || |||||||| ||||| ||
Sbjct 249796 CAGCGAAAATAAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGGACT 249737
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | |||| ||||||| || ||| || |||| ||||| ||| ||||||||
Sbjct 249736 TGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 249682
Score = 111 bits (122), Expect = 2e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
|||||||| ||||| || |||||||| | | | | ||| ||||| ||||||||||
Sbjct 250310 GTGGACTCCTTCTGGATGTTGTAATC--CGAGAGAGTACGGCCATCCTCAAGCTGCTTGC 250253
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| |||| | ||||||||||| || ||||| || |||||||| |||||| ||
Sbjct 250252 CGGCGAAAATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACT 250193
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | || || | | ||| || || | ||| | ||| ||||| ||||| |
Sbjct 250192 TGACATTGTCGATGGTATCTGACGACTCGACCTCAAGGGTAATGGTCTTGCCAGTCAGGG 250133
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 250132 TCTTGACGAAGATCTGCAT 250114
Score = 102 bits (112), Expect = 8e-17
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| || || || ||| |||||| |||||||| |
Sbjct 250538 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT--ACGGCCGTCCTCCAGCTGCTTAC 250481
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || |||||||||||||| ||||| || |||||||| |||||| ||
Sbjct 250480 CAGCAAAGATAAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCT 250421
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| || || | | ||| || || | |||| ||| || || || ||||
Sbjct 250420 TCACGTTGTCAATGGTATCAGAAGACTCGACTTCAAGAGTGATGGTCTTTCCAGTGAGAG 250361
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 250360 TCTTCACGAAGATCTGCAT 250342
>seq14
Length=289536
Score = 111 bits (122), Expect = 2e-19
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || || ||| | | | ||||| |||||||||||
Sbjct 256405 GTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGCC 256347
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| ||||| || || |||||||| |||||| |||
Sbjct 256346 AGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTT 256287
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||| | || ||| || || | ||||| ||| || || ||||| ||
Sbjct 256286 GACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTACCCGTCAGGGT 256227
Query 133643 TTTTACGAAA 133652
|| ||||||
Sbjct 256226 CTTGACGAAA 256217
>seq38
Length=199572
Score = 109 bits (120), Expect = 5e-19
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699
||||| |||||||| ||||| || ||||| || || || ||||||||||| || |||
Sbjct 76723 AGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTC 76664
Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAA 120756
| |||||||| || || || |||| | | || || | ||||||| || ||
Sbjct 76663 AAACCGGGCATCATACC--ACG-CTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAG 76607
Query 120757 AAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG 120816
||||| | ||||| ||| |||||||| |||| |||| ||| || |||| | ||||
Sbjct 76606 AAGAAGATACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGGTCGACTCCTTG 76547
Query 120817 CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
| |||||||||| |||||| |||||||| ||| | ||| || ||
Sbjct 76546 TCGGTAATCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAAT 76497
>seq96
Length=85826
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || || ||||||||||| || || ||||| ||||||
Sbjct 59339 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 59398
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | |||||| | | ||| || || | |||||
Sbjct 59399 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCAAGGGTGATC 59458
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || ||||||||||||||
Sbjct 59459 GTCTTACCCGTAAGGGTCTTAACGAAAATCTGCAT 59493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483418594392600
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