Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq17 98.7 2e-15 >seq17 Length=280677 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 279870 TAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAAT 279929 || ||||||| |||| ||| ||||| ||| |||| | |||||||| || || Sbjct 146092 TATTGGATGGACTGAAGCCTGGTCAGCGCAAGGTTATGTATGCCTGTTTCAAGAGTAACG 146033 Query 279930 TGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATC 279989 |||| ||||| || |||| | |||| || ||||||||||| | || | || | Sbjct 146032 TGGTCAAGGATATGAAGGTTGTTGAGTTGGCTGGTTATGTTTCGGGTCAGACGTCGTACC 145973 Query 279990 ATCACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTT 280049 | ||||||||||| || || || | ||| | |||||||| || || ||| | | || Sbjct 145972 AACACGGTGAAGCTTCCCTGCAGCAGACGATTATTGGTCTTGCTCAGGACTTTGTCGGTT 145913 Query 280050 CAAACAACTTAAATCTGCTTTCA-CCAAATGGTCAATTTGGTTCTCGTATT 280099 | |||||| | ||| ||||| | || | |||| | |||||||||||| || Sbjct 145912 CTAACAACGTCAAT-TGCTTGGAGCCCAGTGGTAACTTTGGTTCTCGTCTT 145863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186807249795765