Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq24 93.3 3e-14
>seq24
Length=264051
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || |||||| ||| || || ||||||||||| ||
Sbjct 250341 ACCACCACGGAGACGGAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 250282
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || | || || | || || ||||| ||||||||||||||||| || | ||
Sbjct 250281 GAGAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCCGGGGG 250222
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || || | | |||| ||| | ||| || || || |
Sbjct 250221 GATACCCTCCTTGTCCTGGATCTT-GGACTTGACATTGTCGATGGTATCTGACGACTCGA 250163
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| || || || || || || | || || || ||||||||||||
Sbjct 250162 CCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 250113
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || |||||||| |||||||| ||||| | || || | ||
Sbjct 250088 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGC 250029
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || || ||||||| ||||||||| || | || | ||| || ||||| || ||
Sbjct 250028 TTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTG 249969
Query 33667 TGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|||| | | |||| |||||| || || || |||| ||||| || || || ||
Sbjct 249968 GACTTCA-CGTTGTCAATGGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 249910
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || |||||||||||||||
Sbjct 249909 CAGGGTCTTGACAAAGATCTGCATA 249885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702537780800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |