Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq38 212 9e-49
seq59 123 4e-22
>seq38
Length=199572
Score = 212 bits (234), Expect = 9e-49
Identities = 399/572 (70%), Gaps = 26/572 (5%)
Strand=Plus/Plus
Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774
|||||| || |||| || ||||| |||||||| || || ||||||||| |||||
Sbjct 76103 CGAGCCCCTCCTGCAAGAGAACCCCAACCGCTTCGTGCTCTTCCCCATCAAGTACCATGA 76162
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||||||||| || ||||| ||||||||| | |||
Sbjct 76163 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGACT 76221
Query 1455835 TCGGCGCCGA----CACGGTCCACTGG--GTGTCGC-TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| ||| ||| | | || || | |||
Sbjct 76222 TGTCCAAGGATCTTCACG----ACTGGAACAACCGCATGACCAAGGATGAACAGTTCTTC 76277
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| ||| || ||||| ||| || || || || ||||||| |||
Sbjct 76278 ATCTCTCACGTCCTTGCC-TTCTTCGCTGCCTCTGACGGTATTGTCAACGAGAACTTGGT 76336
Query 1455948 CGGCCGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006
|| || || | || ||||| || | || ||||| || | |||||||| |||||||
Sbjct 76337 CGAGCGTTTCTCTG-CCGAGGTGCAGATTCCCGAGGCCCGCTGCTTTTACGGTTTCCAGA 76395
Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066
| || || ||||| ||||| || || ||||| ||||||||||| |||||| ||||||
Sbjct 76396 TTATGATGGAGAACATTCACTCGGAGACGTACTCCCTCCTGATCGATACCTACATCAAGG 76455
Query 1456067 ACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
| || | || | || |||| || |||||| || || | || | | |
Sbjct 76456 AGCCTGCTCAG-CGCACGTACCTGTTCAACGCCATTGATACCATTCCTTGCATCCGCCGC 76514
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
|||||||||||||| |||||||||| | |||||||| ||||| ||||||| |||
Sbjct 76515 AAGGCCGACTGGGCCCTGAAGTGGATTACCGACAAGGAG----TCGAC-CTTTGCCCAGC 76569
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241
| || || | |||||| | ||| ||||| ||||| ||||| || || | | ||||
Sbjct 76570 GTCTGGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCTATCT 76629
Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273
||||||| ||||| || | |||||||||
Sbjct 76630 TTTGGCTGCGCAAGCGTGGTATGATGCCCGGT 76661
>seq59
Length=151500
Score = 123 bits (136), Expect = 4e-22
Identities = 205/291 (70%), Gaps = 4/291 (1%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCA-GTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCG 259951
||||||| |||| ||| ||||| ||| || | || || ||||| || || || || ||
Sbjct 87620 CATGTCG-AGCAAGTTCTTCAC-TCATGCATCTCCTACCCTCTTCAACGCTGGTACTCCC 87563
Query 259952 CGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATC 260011
| || ||| ||| || ||||| || | |||||||||| || ||||| || |||
Sbjct 87562 CAGCCCCAGCTTTCTTCTTGCTTCTTGGTAGACATGAAGGAGGACAGTATCGAAGGTATC 87503
Query 260012 TATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCC 260071
|||||||| |||||| ||||| | ||||||||| ||| || ||||| ||| | |
Sbjct 87502 TATGACACCCTCAAGACTTGCGCTATGATCTCCAAGATGGCGGGTGGCATTGGTCTCAAC 87443
Query 260072 GCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGC 260131
| |||| | || || | || | ||| | || ||||||||||| || |||||
Sbjct 87442 GTACACCGTATCCGTGCTACTGGTTCTTACATTGCTGGCACCAACGGTACCTCGAACGGT 87383
Query 260132 CTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|||| |||||| | || || || ||| | || || || |||||||| |||
Sbjct 87382 ATTGTTCCCATGTTGCGTGTCTTCAACAATACTGCTCGTTACGTCGATCAG 87332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177775995079130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |