Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq59 122 7e-23 >seq59 Length=151500 Score = 122 bits (134), Expect = 7e-23 Identities = 288/432 (67%), Gaps = 5/432 (1%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| |||| ||||| || | ||| |||||||| ||||| |||||||| ||| Sbjct 87126 GGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCTCAACACGCTTCATGAAC 87185 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 ||||| || | ||| || || |||| ||| | ||| |||| || |||| Sbjct 87186 AAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGG 87245 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | || | || | || || || | || || ||||| || |||| || | || Sbjct 87246 TTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCA 87305 Query 131783 ATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | || || ||||| ||| || |||| || | |||| | | |||||| | || Sbjct 87306 AAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACA 87365 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 ||||||||||| | | |||||| | | | || ||||||| |||||| ||| | Sbjct 87366 CGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTA 87425 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACC-TCCGCCGTATTTAGAGATTAGTGCGCA 131958 || | ||| ||| |||||||| ||||| || ||||| | || ||||| | ||||| Sbjct 87426 GCACGGATACGGTGTACGTTGAGACCAATGCCACCCGCCAT-CTTGGAGATCATAGCGCA 87484 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 | | || |||| |||||||||||| | |||||| | ||||| || || ||||| Sbjct 87485 AGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCA 87544 Query 132019 AGAGGACAACTG 132030 ||| || | ||| Sbjct 87545 AGAAGAAAGCTG 87556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932509705880