Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq59 237 2e-57
seq17 95.1 2e-14
seq38 93.3 5e-14
>seq59
Length=151500
Score = 237 bits (262), Expect = 2e-57
Identities = 949/1471 (65%), Gaps = 51/1471 (3%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||| ||||| | ||||| || || ||||| || || ||||||| || || | || |
Sbjct 86317 GGTAAATGTTGGAAGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCG 86376
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||||||| ||||| || |||| | ||| ||| |||| ||| | || |||||| | |
Sbjct 86377 AGGCTGTGGGCATAGGGGCCAAAAGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGT 86436
Query 110826 CCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|||| | | | |||||| | | | | || || | || | |||||||||| |||||
Sbjct 86437 CCTTCAAAGAGTTCCAGTCCCACAGGTCA-CTGGGGGTAACAT-CCCACATGTCGAACTG 86494
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
||| | || || || | ||||||||||| |||| |||| ||||| |||
Sbjct 86495 AAGGATACCCTGAGAGACAGGAGAACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGC 86554
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| || || |||||| |||| ||||| || ||||| |||||||| | || |
Sbjct 86555 AATATCGCACGACGCCTCGAGGGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAG 86614
Query 111004 CTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCG 111058
|| ||| ||| | || ||||| |||| || | || || |||| ||
Sbjct 86615 CTGACGGGCCTCAGCAGACTCAAAAGGCATGCGAAGGGCCAGGAAGG-----CATCAGCC 86669
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC- 111117
||||| |||||||| | ||| || || | ||| ||||| || || || || |||
Sbjct 86670 AGACCCTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTACGGGC---CTCG 86726
Query 111118 --AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175
|||||| || || ||||| | ||||| | || ||| | ||| |||
Sbjct 86727 ATAACGGGGTAGTGGTTCACATCAATAATGCGGTTCAAGTTGCGAACAACGACCTTGGTG 86786
Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235
| || || || || | | || | | | | | | | ||| | |||||
Sbjct 86787 ACATCGTGCAGCTTCTGGAAGTCGTAGGAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGA 86846
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|| | || |||| ||||| || || |||||| | | |||||| | || ||
Sbjct 86847 GCAAGAGAAGCCAGGTTGCACACGGCAACCTCATCGGGAGCGCAGTACTCGATGATCTCA 86906
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || | ||||||||| ||| || |||| ||||| ||||||||||| ||||||
Sbjct 86907 GTGCAAAGGTTGGAACTGCGAATAGTTCCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAG 86966
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
||||||||| |||||| | || | || ||||| ||||| | | | ||||| | |
Sbjct 86967 TGATCCTTGTACAGCATGAAAGGGTTACCAGTCTCAGTCTGAGCCTCCAAGATAGCATAC 87026
Query 111416 CA-AACATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGT 111471
|| | | || | | || ||||| | |||| ||||||||| |||||||| ||
Sbjct 87027 CACAGCTTCTGGGCCT----TAATGGTCAGACGGCCACGTCCCTCCTGTTCGTACTTGGT 87082
Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGAC 111530
||||| || ||||| || || ||| || ||| | || || || || || || |
Sbjct 87083 ATAGAGAGCCTCAAATTCATC-GCCATAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGC 87141
Query 111531 AGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
| | |||| ||| ||| | ||| |||||| ||||||||||| | || |||||||||
Sbjct 87142 ACATGAGAGTCCAGTTGCCGTTCTT-CTCAACACGCTTCATGAACAAATCAGGAATCCAC 87200
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
| || || | ||| | | ||| ||| || | ||| ||||| || | |||
Sbjct 87201 AAGGCAAGGAACAAATCGCGAGCACGAATCTCCTCCTTACCGTGGTTCTTCCGGAGATCA 87260
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGA 111709
|||||||| | | ||| |||||||| ||||| || || | || | || || ||
Sbjct 87261 AGGAACTCGAACACATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGCACC---GGGA 87317
Query 111710 CGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
||| ||| | |||| || || || || || ||| || || || | ||| |||
Sbjct 87318 CGCTTGTTACCACCCTGATCGACGTAACGAGCAGTATTGTTGAAGACACGCAACATGGGA 87377
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823
| |||||| | || ||| || || || ||| ||| | | || | | |
Sbjct 87378 ACAATACCGTTCGAGGTACCGTTGGTGCCAGCAATGTAAGAACCAGTAGCACGGATACGG 87437
Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAG 111881
|| | || | ||||| || || ||| ||| ||||| | ||||| | | | | || |
Sbjct 87438 TGTACGTTGAGACCAATGCCACCCGCCATCTTGGAGATCATAGCGCA-AGT-CTTGAGGG 87495
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| |||||||||| | ||| ||||||||| || | | | ||||||| || | ||
Sbjct 87496 TGTCATAGATACCTTCGATACTGTCCTCCTTCATGTCTACCAAGAAGCAAGAAGAAAGCT 87555
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-- 111999
| || || |||||||| ||||||||||| || | ||| ||| ||| | | ||||
Sbjct 87556 GGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGATGCATGAGTGA--AGAACTTGCT 87613
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
||||| || ||| || |||| ||| |||| | || || ||| |||| ||
Sbjct 87614 CGACATGAGGTTGTAAGTTTCCAGAACACGCTCAACATTGTCACCCCAGATACCGACAGC 87673
Query 112060 GACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA 112119
|| ||||| | ||||| ||| || || | | |||| || ||| |||||||
Sbjct 87674 TACACGCATAATCATGTGCTGAGGACGCTCAACAATCTTGCCGTCAAGCTTGAGAAGATA 87733
Query 112120 -GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
| |||| || | ||| |||| |||||||||
Sbjct 87734 GGATCTT-TCCAAGGTCTTGAAACCAAAGTA 87763
>seq17
Length=280677
Score = 95.1 bits (104), Expect = 2e-14
Identities = 200/291 (69%), Gaps = 8/291 (3%)
Strand=Plus/Plus
Query 182516 GAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATA 182575
|||||||||||| || |||||||| | ||| ||| | ||| ||||| ||| |||||||
Sbjct 146577 GAGACCCTTGATATGCGAACCATCGTGATCCTGATCGGCCATGATCATCAGATGACCATA 146636
Query 182576 GCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGT--TGAAGACCAAGGATCTTCTTG 182633
||||| | ||| ||| | | |||||| | |||||| | || || |||
Sbjct 146637 ACGAAGCCCCTTGGTATCCGTGTAAAC--TGCCTTGTGCTTAAGACCCAAGAACTGTTTG 146694
Query 182634 AGATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTT 182692
| || ||||| |||||||| |||| ||| ||| ||||| || ||||| ||
Sbjct 146695 ATAT-TTTGAATTTCCTGGTTCTTGGTAATCTGGTCCAAAGAAGCATCACGAACGTT-GA 146752
Query 182693 ACAT-TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCG 182751
||| ||||| || |||||||| ||||| | | ||| || | | | | |||| |
Sbjct 146753 GCATCTTACCACGGAGTGGGAAAACACCAATGCGGTCAGGATCCAAAATGGCACGACCAG 146812
Query 182752 CAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACT 182802
|||| || | | || ||||| ||||| || || | ||| ||||||||||
Sbjct 146813 CAACGGCCAAAGACTTGGCCGAGTCACCTTCGGTCAGAATCAGAGTACACT 146863
>seq38
Length=199572
Score = 93.3 bits (102), Expect = 5e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| ||||||||||| ||||| || || || ||||||||| | |||
Sbjct 76718 GGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACC 76659
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||| | ||| ||||| || |||| | |||| | || | || |||||||||||
Sbjct 76658 GGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGAT 76599
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
|||||| || ||||| |||| || || | ||| ||||
Sbjct 76598 ACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGG 76558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029134604000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |