Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06-
26] 365 sequences; 25,429,610 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq59 149 8e-31
seq38 100 4e-16
seq17 100 4e-16
>seq59
Length=151500
Score = 149 bits (164), Expect = 8e-31
Identities = 945/1501 (63%), Gaps = 37/1501 (2%)
Strand=Plus/Plus
Query 118143 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 118202
|||||||| |||||||| || | || | | | || || |||| ||||| |||
Sbjct 86280 TTGACAACCTGGAACTCACCAGCCAACACACGGCGCTGGTAAATGTTGGAAGTGTAAGGC 86339
Query 118203 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 118262
|| |||||||| |||||||||| || |||| || |||||||||||||| || ||||
Sbjct 86340 TCGAAGCACTCGTTGTTACCCAGAATCTGGGACGTCGAGGCTGTGGGCATAGGGGCCAAA 86399
Query 118263 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT--CGT 118320
|||||| ||| || | ||| | | | | || | ||||| | || || ||||| |
Sbjct 86400 AGAAGGGAGTTGCGAACACCGTGCTGCTTGATCTGGTCCTTCAAAGAGTTCCAGTCCCAC 86459
Query 118321 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 118380
|| | | || | | | | |||||| || ||||| |||||||| || || | || |
Sbjct 86460 AGGTCA-CTGGGGGT-AACATCCCACATGTCGAACTGAAGGATACCCTGAGAGACAGGAG 86517
Query 118381 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 118440
| ||||| | ||| || || || |||| || | ||| | |||||||||||
Sbjct 86518 AACCCTCGTAGGTCGAGTAGGGACCTTCAAGAATAGCAATATCGCACGACGCCTCGAGGG 86577
Query 118441 CTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGAATCA 118499
| ||||| || || || ||||| || | || | || | |||||| | || |||
Sbjct 86578 CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTGAGCTGAC-GGGCCTCAGCAGACTCA 86636
Query 118500 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 118559
|| | | || | || |||| || ||||| || ||||| | || || |||
Sbjct 86637 AAAGGCATGCGAAGGGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCGATGGGG 86696
Query 118560 CGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATA 118616
|| || | ||| || || || || ||| ||||| || ||| ||| |||
Sbjct 86697 CGGTGGCGCATGTTGCTGTTACG---GGCCTCGATAACGGGGTAGTGGTTCACATCAATA 86753
Query 118617 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 118676
| | || | || || ||||| |||| || || ||||| | | | || |
Sbjct 86754 ATGCGGTTCAAGTTGCGAACAACGACCTTGGTGACATCGTGCAGCTTCTGGAAGTCGTAG 86813
Query 118677 CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 118736
| | | | | ||| | |||||| || | || ||||| || ||||| |
Sbjct 86814 GAGTTGTTGTTGTAGTCAACAAAGGCAGGAAGAGCAAGAGAAGCCAGGTTGCACACGGCA 86873
Query 118737 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTG 118796
|||||| | | |||||| || || || ||||| | ||| ||||| ||| ||
Sbjct 86874 ACCTCATCGGGAGCGCAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGAATAGTT 86933
Query 118797 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 118856
|||| |||||| || || ||| ||| || ||||||||| |||||| | || |
Sbjct 86934 CCCAGGTTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAAGGGTTA 86993
Query 118857 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGG--CACAGTGG 118914
|| ||||| || || | || | ||||| | ||| | || |||| | | |||
Sbjct 86994 CCAGTCTCAGTCTGAGCCTCCAAGATAGCATACCA-----CAGCTTCTGGGCCTTAATGG 87048
Query 118915 --CGTTGG-CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCA 118971
| || | || ||||| | |||||||| || ||||| || ||||| || || ||
Sbjct 87049 TCAGACGGCCACGTCCCTCCTGTTCGTACTTGGTATAGAGAGCCTCAAATTCATCGCCAT 87108
Query 118972 CGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCT 119031
| || | || || || || | ||||| | ||||| ||| | || || ||
Sbjct 87109 AGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTTGCCGTTCTTCT 87168
Query 119032 CAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAG 119091
|||| ||||||||||| | || || ||||| | || ||| | ||| ||| |||
Sbjct 87169 CAACACGCTTCATGAACAAATCAGGAATCCACAAGGCAAGGAACAAATCGCGAGCACGAA 87228
Query 119092 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 119151
|| || | || || || || | || | || || | | ||| ||||||||||
Sbjct 87229 TCTCCTCCTTACCGTGGTTCTTCCGGAGATCAAGGAACTCGAACACATCAGCGTGCCACG 87288
Query 119152 GTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCG 119208
| |||||||| | || | | || ||| |||| |||| | || || | |
Sbjct 87289 GCTCCAGGTAAATGGCAAAAGCACCGGGACGCTTGTTACCACCCTGATCGACGTAACGAG 87348
Query 119209 CAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCC 119268
|||| ||| || ||||| | ||| |||| ||||| | || || || || ||
Sbjct 87349 CAGTATTGTTGAAGACACGCAACATGGGAACAATACCGTTCGAGGTACCGTTGGTGCCAG 87408
Query 119269 GAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 119328
||| ||| | | || | || | ||| | || | |||||| || || ||| ||
Sbjct 87409 CAATGTAAGAACCAGTAGCACGGATACGGTGTACGTTGAGACCAATGCCACCCGCCATCT 87468
Query 119329 TTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 119388
| ||||| ||||| | |||| || | ||||| || ||||| ||| ||||
Sbjct 87469 TGGAGATCATAGCGCAAGTCTTGAGGGTGTCATAGATACCTTCGATACTGTCCTCCTTCA 87528
Query 119389 TTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTG 119448
| | | | |||||| || | || ||| ||| ||||||||||||||||| || |
Sbjct 87529 TGTCTACCAAGAAGCAAGAAGAAAGCTGGGGCTGGGGAGTACCAGCGTTGAAGAGGGTAG 87588
Query 119449 GTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCC--AAGACG-GC 119503
| | || || ||| | | |||| ||||| || ||| || ||| || ||| |
Sbjct 87589 GAGATGCATGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTTTCCAGAACACGCTC 87646
Query 119504 GGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTC 119563
| |||| ||| | ||||||| | || ||||||| ||||| || || ||
Sbjct 87647 AACATTGTCACCCCAG---ATACCGACAGCTACACGCATAATCATGTGCTGAGGACGCTC 87703
Query 119564 CATCAGGATACCATCGAGCCTCTGGAGGTA-ACTCTTCTCCAAGGTCTTGAGACCAAAAT 119622
| | | || || ||| | | || || |||| ||||||||||||| |||||| |
Sbjct 87704 AACAATCTTGCCGTCAAGCTTGAGAAGATAGGATCTT-TCCAAGGTCTTGAAACCAAAGT 87762
Query 119623 A 119623
|
Sbjct 87763 A 87763
>seq38
Length=199572
Score = 100 bits (110), Expect = 4e-16
Identities = 340/525 (65%), Gaps = 15/525 (3%)
Strand=Plus/Minus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| |||||||| ||||||||||| || || || |||||| || |||
Sbjct 76718 GGCAAAGTCGGTGTGAAGACCCTCATCACGGGAGATCAGCTCGTTTGAGAAGGTCAAACC 76659
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||| | ||| ||||| || ||| || || | ||| | ||||||||||||||
Sbjct 76658 GGGCATCATACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCACCAGAGAAGAAGAT 76599
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193
||||| || || || |||| ||||||| ||||||| || | |||| ||
Sbjct 76598 ACCCTCAACGGCAGCAAAGGCAACCAGACGCTGGGCAAAGG-TCGACTCCTTGTCGGTAA 76540
Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253
|||||||| ||||| | ||||| ||| || || | ||| | || || | |
Sbjct 76539 TCCACTTCAGGGCCCAGTCGGCCTTGCGGCGGATGCAAGGAATGGTATCAATGGCGTTGA 76480
Query 130254 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 130313
| || | | | | | || || |||||||| |||| || || || || || |
Sbjct 76479 ACAGGTACGTGCGCTGAGCAGGCTCCTTGATGTAGGTATCGATCAGGAGGGAGTACGTCT 76420
Query 130314 CGCCATGGACCATT-----TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 130368
| | | || || |||| || ||| | |||| || |||| || |||
Sbjct 76419 C-CGAGTGAATGTTCTCCATCATAAT----CTGGAAACCGTAAAAGCAGCGGGCCTCGGG 76365
Query 130369 TATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 130428
||||| ||||| | | ||| | | ||||| ||||| || || || |
Sbjct 76364 AATCTGCACCTCGGCAGAGAAACGCTCGACCAAGTTCTCGTTGACAATACCGTCAGAGGC 76305
Query 130429 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 130485
||| || || || |||| | ||||| |||||||| || | ||| || | ||
Sbjct 76304 AGCGAAGAAGGCAAGGACGTGAGAGATGAAGAACTGTTCATCCTTGGTCATGCGGTTGTT 76245
Query 130486 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||||| ||||||||| || | || | |||||| ||||||||
Sbjct 76244 CCAGTCGTGAAGATCCTTGGACAAGTCAATCTCCTCGGCAGTCCA 76200
>seq17
Length=280677
Score = 100 bits (110), Expect = 4e-16
Identities = 208/302 (69%), Gaps = 12/302 (4%)
Strand=Plus/Plus
Query 179766 ATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAG 179825
||||| | ||||||||| || || |||||||||| |||| ||| | ||| ||||| ||
Sbjct 146568 ATTGATCAAGAGACCCTTGATATGCGAACCATCGTGATCCTGATCGGCCATGATCATCAG 146627
Query 179826 CCGACCATAGCGAAGCTC---GGAAACATCTTGATAATCCTTACCTTGT--TGAAGACCC 179880
||||||| |||||| | || | | | || ||| | | |||||| | |||||||
Sbjct 146628 ATGACCATAACGAAGCCCCTTGGTATC--CGTG-TAAAC--TGCCTTGTGCTTAAGACCC 146682
Query 179881 AAGATCTTCTTGAGATCATTGAA-CTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATC 179939
|||| || |||| || ||||| || ||||| || | || ||| ||||||||
Sbjct 146683 AAGAACTGTTTGATAT-TTTGAATTTCCTGGTTCTTGGTAATCTGGTCCAAAGAAGCATC 146741
Query 179940 TCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCAC 179999
|| || || ||| |||||||| ||||| ||||| | | ||| || | | |
Sbjct 146742 ACGAACGTTGAGCATCTTACCACGGAGTGGGAAAACACCAATGCGGTCAGGATCCAAAAT 146801
Query 180000 AGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA 180059
| |||||||||| || | | ||| || || ||||| || |||| || || |||||
Sbjct 146802 GGCACGACCAGCAACGGCCAAAGACTTGGCCGAGTCACCTTCGGTCAGAATCAGAGTACA 146861
Query 180060 CT 180061
||
Sbjct 146862 CT 146863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618432378389400
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